1337 results
Search Results
Now showing 1 - 10 of 1337
Article Citation - WoS: 3Citation - Scopus: 3Detection of spermatogonial stem/progenitor cells in prepubertal mouse testis with deep learning(Springer/plenum Publishers, 2023) Kahveci, Burak; Onen, Selin; Akal, Fuat; Korkusuz, PetekPurposeRapid and easy detection of spermatogonial stem/progenitor cells (SSPCs) is crucial for clinicians dealing with male infertility caused by prepubertal testicular damage. Deep learning (DL) methods may offer visual tools for tracking SSPCs on testicular strips of prepubertal animal models. The purpose of this study is to detect and count the seminiferous tubules and SSPCs in newborn mouse testis sections using a DL method.MethodsTesticular sections of the C57BL/6-type newborn mice were obtained and enumerated. Odd-numbered sections were stained with hematoxylin and eosin (H&E), and even-numbered sections were immune labeled (IL) with SSPC specific marker, SALL4. Seminiferous tubule and SSPC datasets were created using odd-numbered sections. SALL4-labeled sections were used as positive control. The YOLO object detection model based on DL was used to detect seminiferous tubules and stem cells.ResultsTest scores of the DL model in seminiferous tubules were obtained as 0.98 mAP, 0.93 precision, 0.96 recall, and 0.94 f1-score. The SSPC test scores were obtained as 0.88 mAP, 0.80 precision, 0.93 recall, and 0.82 f1-score.ConclusionSeminiferous tubules and SSPCs on prepubertal testicles were detected with a high sensitivity by preventing human-induced errors. Thus, the first step was taken for a system that automates the detection and counting process of these cells in the infertility clinic.Article Citation - WoS: 1Citation - Scopus: 1Structural and Optical Properties of Thermally Evaporated Ga-In Thin Films(World Scientific Publ Co Pte Ltd, 2014) Isik, Mehmet; Gullu, Hasan HuseyinIn this paper, structural and optical properties of Ga-In-Se (GIS) thin films deposited by thermal evaporation technique have been investigated. The effect of annealing was also studied for samples annealed at temperatures between 300 degrees C and 500 degrees C. X-ray diffraction, energy dispersive X-ray analysis and scanning electron microscopy have been used for structural characterization. It was reported that increase of annealing temperature results with better crystallization and chemical composition of the films were almost same. Optical properties of the films were studied by transmission measurements in the wavelength range of 320-1100 nm. The direct bandgap transitions with energies in the range of 1.52 eV and 1.65 eV were revealed for the investigated GIS films. Photon energy dependence of absorption coefficient showed that there exist three distinct transition regions for films annealed at 400 degrees C and 500 degrees C. The quasicubic model was applied for these transitions to calculate crystal-field splitting and spin-orbit splitting energy values.Article Citation - Scopus: 2The Effects of Paddy Cultivation and Microbiota Members on Arsenic Accumulation in Rice Grain(Mdpi, 2023) Ersoy Omeroglu, Esra; Bayer, Asli; Sudagidan, Mert; Ozalp, Veli Cengiz; Yasa, IhsanAccess to safe food is one of the most important issues. In this context, rice plays a prominent role. Because high levels of arsenic in rice grain are a potential concern for human health, in this study, we determined the amounts of arsenic in water and soil used in the rice development stage, changes in the arsC and mcrA genes using qRT-PCR, and the abundance and diversity (with metabarcoding) of the dominant microbiota. When the rice grain and husk samples were evaluated in terms of arsenic accumulation, the highest values (1.62 ppm) were obtained from areas where groundwater was used as irrigation water, whereas the lowest values (0.21 ppm) occurred in samples from the stream. It was observed that the abundance of the Comamonadaceae family and Limnohabitans genus members was at the highest level in groundwater during grain formation. As rice development progressed, arsenic accumulated in the roots, shoots, and rice grain. Although the highest arsC values were reached in the field where groundwater was used, methane production increased in areas where surface water sources were used. In order to provide arsenic-free rice consumption, the preferred soil, water source, microbiota members, rice type, and anthropogenic inputs for use on agricultural land should be evaluated rigorously.Article Citation - WoS: 77Citation - Scopus: 78Electrical Properties of Al/Pcbm:zno Heterojunction for Photodiode Application(Elsevier Science Sa, 2020) Gullu, H. H.; Yildiz, D. E.; Kocyigit, A.; Yildirim, M.In this paper, the electrical characteristics of spin-coated PCBM:ZnO interlayered Al/PCBM:ZnO/Si diode are investigated under the aim of photodiode application. Under dark condition, the diode shows about four orders in magnitude rectification rate and diode illumination results in efficient rectification with increase in intensity. The analysis of current-voltage curve results a non-ideal diode characteristics according to the thermionic emission model due to the existence of parasitic resistances and interface states. The measured current-voltage values are used to extract the barrier height and ideality factor under dark and illumination conditions. Under illumination, photo-generated carriers contribute to the current flow and linear photo-conductivity behavior in photo-current measurements with illumination shows the possible use of hybrid PCBM:ZnO layer in Si-based photodiodes. In addition, change in the series and shunt resistance values under illumination is found to be effective in this light-sensing behavior of the diode. This characteristic is also observed from the typical on/off illumination switching behavior for the photodiodes in transient photo-current, photo-capacitance and photo-conductance measurements with the quick response to the illumination. The deviations from ideality are also discussed by means of distribution of interface states and series resistance depending on the applied frequency and bias voltage. (C) 2020 Elsevier B.V. All rights reserved.Article Citation - Scopus: 1An Activity-Based Lessons Learned Model To Support Scheduling Decisions in Construction(Emerald Group Publishing Ltd, 2025) Yilmaz, Anil; Akcay, Emre Caner; Dikmen, Irem; Birgonul, M. TalatPurposeThe aim of this study is to develop an activity-based lessons-learned model that allows construction companies to capture, store, classify and reuse activity-related lessons learned (LL) from previous projects, thereby increasing the reliability of time estimates in scheduling.Design/methodology/approachScheduling is a knowledge-intensive process that requires the utilization of data and expert opinion elicitation from various levels of an organization in construction projects. This research consists of five successive steps: performing a needs analysis, proposing an activity-based lessons-learned process model, validating the proposed process model, developing a tool to apply the proposed model in a computer environment and testing the applicability of the tool. To implement the proposed model in practice, a web-based tool, namely the Construction Industry Scheduling with Activity-Based Lessons Learned Tool (ConSALL Tool), was developed. Its functionality was evaluated using black-box testing. The tool was then applied in a real construction project.FindingsResults show that ConSALL has the potential to improve scheduling decisions in construction projects by incorporating data and experience from previous projects. Findings from this research can be used to develop similar models and AI tools to foster activity-based learning in other project-based industries as well as the construction industry.Originality/valueThis paper presents an innovative approach to enhancing construction project scheduling by leveraging LL from past projects. The development and application of the ConSALL Tool demonstrate a practical implementation of the proposed model, providing a framework that can be adapted to other industries to improve project planning and execution.Article Citation - WoS: 24Citation - Scopus: 34Optimization and Thermal Analysis of Radial Ventilated Brake Disc To Enhance the Cooling Performance(Elsevier, 2022) Jafari, Rahim; Akyuz, RecepVentilated brake discs are preferable to automobile application because of their higher heat dissipation ability than solid discs. The shape, geometry and number of the cooling fins are interested parameters to be investigated to improve the cooling performance of the discs. In the present study, the optimum design of the brake disc with radial vanes is investigated numerically using the Taguchi design of experiments with taking into account nine design parameters. Finite element method is employed to simulate the detailed airflow and temperature distribution in the disc considering adjoined components as pads, rim, tire and dust shield. It has been found that the ventilation gap width has the highest impact on the brake disc cooling. The cooling time of the disc decreases 21% as the ventilation gap increases from 8 mm to 14 mm. In addition, it reduces about 10% with the increment of the channel width between two adjacent vanes (inverse of vane numbers from 43 to 30) and the twist point from 225 mm to 266 mm. In a decreasing order of importance, fin angle, inner and outer diameters of fin, dust shield, bell link and disc material affect the cooling performance of the ventilated disc.Article Citation - WoS: 5Citation - Scopus: 14Existence of a Solution of Integral Equations Via Fixed Point Theorem(Springeropen, 2013) Gulyaz, Selma; Karapinar, Erdal; Rakocevic, Vladimir; Salimi, PeymanIn this paper, we establish a solution to the following integral equation: u(t) = integral(T)(0) G(t, s)f(s, u(s)) ds for all t is an element of [0,T], (1) where T > 0, f : [0, T] x R -> R and G : [0, T] x [0, T] -> [0, infinity) are continuous functions. For this purpose, we also obtain some auxiliary fixed point results which generalize, improve and unify some fixed point theorems in the literature.Article Citation - WoS: 8Citation - Scopus: 10Proposing a novel mixed-reality framework for basic design and its hybrid evaluation using linkography and interviews(Springer, 2022) Cindioglu, Hasane Ceren; Gursel Dino, Ipek; Surer, ElifImmersive Virtual Environments (IVEs), particularly Mixed-Reality (MR) technologies, continue to have an increasing impact on design processes and design education. This study focuses on MR's potentials in Basic Design (BD) education and its influence on novice designers' design thinking abilities. In this study, through a newly developed MR-based design framework, DesignMR, a comparative analysis between design processes in MR and the physical environment is presented. A hybrid evaluation methodology is used in the context of three-dimensional (3D) BD tasks through two sets of protocol studies: Linkography and exit interviews. Linkography is a method to analyze the design process based on detecting design moves and their links with each other. In this study, linkographic analyses point to an increase in critical moves and link index values in MR as compared to the physical environment for all participants. This indicates that MR can trigger improved creativity, design productivity, and design exploration by idea generation. Exit interviews highlighted the positive impact of DesignMR on the motivation, work efficiency, and 3D perception of the participants. Further research will be pursued for improved hand gestures to increase the effectiveness of object interaction.Article Citation - WoS: 14Citation - Scopus: 14Discrete Time Series-Parallel System and Its Optimal Configuration(Elsevier Sci Ltd, 2021) Dembinska, Anna; Eryilmaz, SerkanThis paper is concerned with properties of series-parallel systems when the component lifetimes have discrete failure time distribution. For a series-parallel system consisting of a specified number of subsystems, we particularly focus on the number of failed components in each subsystem at the time when the system fails. Each subsystem is assumed to have identical components while different subsystems have different types of components. Assuming all components within the system are independent, we obtain exact distributions of the number of failed components at the time when the system fails. For the special case when the components have phase-type failure time distributions, matrix-based expressions are derived for the quantities under concern. The results are used to obtain optimal configuration of the series-parallel system which is replaced at failure.Article Citation - WoS: 22Citation - Scopus: 21Synthesis and Thermoluminescence Properties of Rare Earth Oxides (y, Ce-Lu) Doped Lithium Triborate(Elsevier Science Bv, 2011) Depci, Tolga; Ozbayoglu, Gulhan; Yilmaz, AysenLithium triborate (LiB(3)O(5)) was synthesized by high temperature solid-state reaction method, and then rare earth oxides were doped into LiB(3)O(5) to enhance its thermoluminescent (TL) properties. The identification and characteristics of the obtained compounds were determined by X-ray diffraction (XRD), Fourier transform infrared (FTIR) analyses, differential thermal analyses (DTA) and scanning electron microscopy (SEM). The glow curves were obtained using a thermoluminescent (TL) reader. The results revealed that all the rare earth oxides were not good activators for lithium triborate and the obtained compounds could not be used for dosimetric applications.
