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Book Part Clinical Development of Quinone-Based Drugs(Elsevier, 2024) Altuner, E.E.; Issa, G.; Ozalp, V.C.; Aldemir, O.; Torlak, Y.; Dar, U.A.This chapter provides a detailed explanation of the clinical investigations, pharmacological effects, and characteristics of quinone and quinone derivatives, along with references to pertinent sources. Although quinones have an oxygen group in their structure, they are quickly oxidized and interact with reactive oxygen species. This demonstrates how quinones work as drugs. Quinones and their derivatives are used as medications to treat a wide range of diseases, including cancer, lung, kidney, brain, and tumor disorders. Each of the following has effects on a different area of health; lapochols, anthraquinones, naphthoquinone and its derivatives, and other wide range of quinone derivatives are thoroughly explored in this chapter. © 2025 Elsevier Inc. All rights reserved.Article Citation - WoS: 39Citation - Scopus: 44A Novel Treatment Strategy for Preterm Birth: Intra-Vaginal Progesterone-Loaded Fibrous Patches(Elsevier, 2020) Cam, Muhammet Emin; Hazar-Yavuz, Ayse Nur; Cesur, Sumeyye; Ozkan, Ozan; Alenezi, Hussain; Sasmazel, Hilal Turkoglu; Edirisinghe, MohanProgesterone-loaded poly(lactic) acid fibrous polymeric patches were produced using electrospinning and pressurized gyration for infra-vaginal application to prevent preterm birth. The patches were intravaginally inserted into rats in the final week of their pregnancy, equivalent to the third trimester of human pregnancy. Maintenance tocolysis with progesterone-loaded patches was elucidated by recording the contractile response of uterine smooth muscle to noradrenaline in pregnant rats. Both progesterone-loaded patches indicated similar results from release and thermal studies, however, patches obtained by electrospinning had smaller average diameters and more uniform dispersion compared to pressurized gyration. Patches obtained by pressurized gyration had better results in production yield and tensile strength than electrospinning; thereby pressurized gyration is better suited for scaled-up production. The patches did not affect cell attachment, viability, and proliferation on Vero cells negatively. Consequently, progesterone-loaded patches are a novel and successful treatment strategy for preventing preterm birth.Article Citation - WoS: 18Citation - Scopus: 18Metagenomic and Chemical Analysis of Tarhana During Traditional Fermentation Process(Elsevier, 2021) Soyucok, Ali; Yurt, Mediha Nur Zafer; Altunbas, Osman; Ozalp, Veli Cengiz; Sudagidan, MertTarhana is one of the favourable traditional fermented food consumed as a soup. Different flour, vegetables, spices and yogurt are main constituents and they compose of microbiota of Tarhana. In this study, bacterial communities in each fermentation process and in their constituents were identified by metagenomic analysis. Also, chemical properties (pH, acidity, salt content and dry matter) were analysed in each step. The results showed that in the dough formation, mainly Lactobacillus, Bacillus, Enterococcus and Streptococcus were present and after Day 4, Clostridium and Bacillus became dominant, after drying Clostridium disappeared and in the final product bacterial communities from Bacillus and Streptococcus genus were observed. Chemical analysis showed that pH decreased from 4.94 to 4.46, acidity increased by time at the beginning of fermentation from 7.5% to 22.5% in first 6 days period, then, became stable at 14% in drying process. Salt content increased by time from 1.74 to 3.08 g salt/100 g Tarhana in first 8 days and in drying process salt content was recorded as 2.81-2.90 and dry matter was obtained as 94 g dry matter/100 g Tarhana in the final product. This study elucidated the effects of ingredients, raw materials and how microbiota and chemical properties changes during fermentation steps of home-made traditional Tarhana production and thus preparation methods could be developed to obtain standardized Tarhana products for industrial production in future.Article Citation - WoS: 19Citation - Scopus: 21Lyapunov Type Inequalities for Mixed Nonlinear Riemann-Liouville Fractional Differential Equations With a Forcing Term(Elsevier, 2017) Agarwal, Ravi P.; Ozbekler, AbdullahIn this paper, we present some new Lyapunov and Hartman type inequalities for Riemann-Liouville fractional differential equations of the form ((a)D(alpha)x)(t) + p(t) vertical bar x(t) vertical bar(mu-1) x(t) + q(t) vertical bar x(t) vertical bar(gamma-1) x(t) = f(t), where p, q, f are real-valued functions and 0 < gamma < 1 < mu < 2. No sign restrictions are imposed on the potential functions p, q and the forcing term f. The inequalities obtained generalize and compliment the existing results for the special cases of this equation in the literature. (C) 2016 Elsevier B.V. All rights reserved.Article Citation - WoS: 45Citation - Scopus: 49Recrystallization and Grain Growth Kinetics of In718 Manufactured by Laser Powder Bed Fusion(Elsevier, 2022) Dogu, Merve Nur; Davut, Kemal; Obeidi, Muhannad Ahmed; Yalcin, Mustafa Alp; Gu, Hengfeng; Low, Thaddeus Song En; Brabazon, DermotThe recrystallization and grain growth behaviour of IN718 alloy additively manufactured by laser powder bed fusion (L-PBF) is presented herein. The effects of three different temperatures (1050, 1150 and 1250 degrees C) and holding times (15, 45 and 90 min) were investigated. The texture evolution of the samples was recorded via electron backscatter diffraction (EBSD). The as-built sample is composed of bowl-shaped melt pools, a chessboard-like grain pattern and has a cube texture {100}<001>. Recrystallized grains were observed in the samples treated at 1150 degrees C for 15 min, as well as the samples treated for longer periods and at higher temperatures. Recrystallization was observed to start from high dislocation density regions, including the overlapping melt pools and the borders of the chessboard-like pattern. The initial cube texture transforms into a first-generation cube-twin texture {122}<212> via a twinning-assisted recrystallization mechanism. Then, those recrystallization nuclei sweep through the high defect density matrix; during which almost no new twins are formed. The samples treated at 1250 degrees C are almost completely recrystallized, which forms a weaker cube texture and a stronger P-orientation {011}<112>. However, the growth of recrystallized grains is very limited due to the presence of non-coherent precipitates. (C) 2022 The Author(s). Published by Elsevier B.V.Article Citation - WoS: 22Citation - Scopus: 25Effect of Solution Heat Treatment on the Microstructure and Crystallographic Texture of In939 Fabricated by Powder Bed Fusion-Laser Beam(Elsevier, 2023) Dogu, Merve Nur; Ozer, Seren; Yalcin, Mustafa Alp; Davut, Kemal; Bilgin, Guney Mert; Obeidi, Muhannad Ahmed; Brabazon, DermotThe effect of various solution heat treatment temperatures (i.e., 1120, 1160, 1200 and 1240 & DEG;C) on the microstructure, grain morphology and crystallographic texture of IN939 fabricated by powder bed fusion-laser beam (PBF-LB) was investigated. Microstructural analyses showed that the high-temperature gradient and rapid solidification of the PBF-LB processing caused different resulting microstructures compared to conventionally pro-duced counterparts. The melt pool morphologies and laser scanning paths were examined in the as-fabricated samples in the XZ-and XY-planes, respectively. After the application of solution heat treatment at 1120 & DEG;C, the as-fabricated PBF-LB initial microstructure was still apparent. For solution heat treatments of 1200 & DEG;C and above, the melt pool and scanning path morphologies disappeared and converted into a mixture of columnar grains in the XZ-plane and equiaxed grains in the XY-plane. On the other hand, large equiaxed grains were observed when the samples were solutionized at 1240 & DEG;C. Additionally, g' phase precipitated within the matrix after all solution heat treatment conditions, which led to increase in the microhardness values. According to electron backscatter diffraction (EBSD) analyses, both as-fabricated and solution heat-treated samples had intense texture with {001} plane normal parallel to the building direction. The first recrystallized grains began to appear when the samples were subjected to the solution heat treatment at 1160 & DEG;C and the fraction of the recrystallized grains increased with increasing temperature, as supported by kernel average misorientation (KAM) and grain spread orientation (GOS) analyses.& COPY; 2023 The Author(s). Published by Elsevier B.V. This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).Article Citation - WoS: 5Citation - Scopus: 6Clinic-Oriented Injectable Smart Material for the Treatment of Diabetic Wounds: Coordinating the Release of Gm-Csf and Vegf(Elsevier, 2024) Kinali, Hurmet; Kalaycioglu, Gokce Dicle; Boyacioglu, Ozge; Korkusuz, Petek; Aydogan, Nihal; Vargel, IbrahimChronic wounds are often caused by diabetes and present a challenging clinical problem due to vascular problems leading to ischemia. This inhibits proper wound healing by delaying inflammatory responses and angiogenesis. To address this problem, we have developed injectable particle-loaded hydrogels which sequentially release Granulocyte-macrophage- colony-stimulating-factor (GM-CSF) and Vascular endothelial growth factor (VEGF) encapsulated in polycaprolactone-lecithin-geleol mono-diglyceride hybrid particles. GM-CSF promotes inflammation, while VEGF facilitates angiogenesis. The hybrid particles (200 -1000 nm) designed within the scope of the study can encapsulate the model proteins Bovine Serum Albumin 65 +/- 5 % and Lysozyme 77 +/- 10 % and can release stably for 21 days. In vivo tests and histological findings revealed that in the hydrogels containing GM-CSF/VEGF-loaded hybrid particles, wound depth decreased, inflammation phase increased, and fibrotic scar tissue decreased, while mature granulation tissue was formed on day 10. These findings confirm that the hybrid particles first initiate the inflammation phase by delivering GM-CSF, followed by VEGF, increasing the number of vascularization and thus increasing the healing rate of wounds. We emphasize the importance of multi-component and sequential release in wound healing and propose a unifying therapeutic strategy to sequentially deliver ligands targeting wound healing stages, which is very important in the treatment of the diabetic wounds.Article Citation - WoS: 25Citation - Scopus: 25A Model for the Prediction of Thermal Runaway in Lithium-Ion Batteries(Elsevier, 2024) Azuaje-Berbeci, Bernardo J.; Ertan, H. BulentThe increasing popularity of electric vehicles is driving research into lithium -ion batteries (LIBs). Thermal runaway (TR) in LIBs is a serious concern for the safe operation of these high-energy-density batteries that is yet to be overcome. A reliable model is needed to predict voltage variation, heat generation, temperature rise, and the process leading to TR of a LIB battery under its operating conditions (charging-discharging). Such a model can be used to design battery packs more resilient to thermal runaway or assess how a battery pack would perform under hazardous conditions. Furthermore, it can be used for generating a warning signal if there is a possibility of the battery going towards TR. This paper presents an approach to solving this problem, which is not currently well addressed in the literature. The approach adopted in this paper is based on a numerical analysis of a multilayered electrochemical-thermal model of LIB. Tuning the parameters of a LIB for accurate results from this numerical model is presented, as well as the details of the approach in the paper. Experiments are performed under several LIBs, and their voltage and surface temperature variations are measured under various operating conditions, including thermal runaway. The results of the experiments are compared with the predictions of the numerical simulations. An excellent agreement is observed with the experimental results, proving the accuracy of the proposed approach. This approach can be configured to give results in a few minutes. The paper also discusses how the developed approach can be used to create a TR warning during operating conditions or to change the mode of operation of a LIB before a hazard occurs.Article Citation - WoS: 5Citation - Scopus: 7Design of Novel Tellurium and Selenium Containing Semiconducting Polymers Using Quantum Mechanical Tools(Elsevier, 2017) Kaya, Birnur; Kayi, HakanStructural, optical and electronic properties of the two novel donor-acceptor-donor type conjugated polymers based on 4,7-di(selenophen-2-yl)benzo[c][1,2,5]selenadiazole (SeSeSe) and 4,7-di(tellurophen-2-yl)benzo[c][1,2,5]telluradiazole (TeTeTe) are investigated by means of quantum chemical calculations utilizing conventional and long-range corrected hybrid functionals. The lowest energy structures of the SeSeSe and TeTeTe monomers and oligomers are revealed through conformational analysis, while their electronic properties are obtained from density functional theory (DFT) molecular orbital calculations and optical properties are obtained from the time dependent DFT (TD-DFT) calculations for UV-vis absorption spectra. Electronic band gaps that directly affect the semiconducting properties of these novel polymers are calculated by using linear regression analysis of DFT data, and also periodic boundary conditions calculations (PBC-DFT). Our results indicate that SeSeSe and TeTeTe polymers have considerably lower band gap values than that of their furan-, thiophene-, benzooxadiazole- and benzothiadiazole-based analogs. The novel SeSeSe and TeTeTe polymers with improved optical and electronic properties may have an important role in the near future, especially for the optoelectronic and photovoltaic applications. (C) 2016 Elsevier B.V. All rights reserved.Article Citation - WoS: 10Citation - Scopus: 11Low Temperature Thermoluminescence of Gd2o3< Nanoparticles Using Various Heating Rate and tmax< - texc< Methods(Elsevier, 2019) Delice, Serdar; Isik, Mehmet; Gasanly, Nizami M.Thermoluminescence (FL) measurements for Gd2O3 nanoparticles were carried out for various heating rates between 0.3 and 0.8 K/s at low temperatures (10-280 K). TL spectrum exhibited two observable and one faint peaks in the temperature region of 10-100 K, and four peaks in the temperature region of 160-280 K. Heating rate analysis was achieved to understand the behaviors of trap levels. It was seen that the peak maximum temperatures and TL intensities of all peaks increase with increasing heating rate. This behavior was ascribed to anomalous heating rate effect. T-max - T(exc )analysis was accomplished for TL, peaks at relatively higher temperature region to reveal the related traps depths. T-max - T-exc plot presented a staircase structure indicating that the TL glow curve is composed of well separated glow peaks. Mean activation energies of trapping centers corresponding to these separated peaks were found as 0.43, 0.50, 0.58 and 0.80 eV.
