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Review Citation - WoS: 75Citation - Scopus: 120Hybrid Blockchain Platforms for the Internet of Things (iot): a Systematic Literature Review(Mdpi, 2022) Alkhateeb, Ahmed; Catal, Cagatay; Kar, Gorkem; Mishra, AlokIn recent years, research into blockchain technology and the Internet of Things (IoT) has grown rapidly due to an increase in media coverage. Many different blockchain applications and platforms have been developed for different purposes, such as food safety monitoring, cryptocurrency exchange, and secure medical data sharing. However, blockchain platforms cannot store all the generated data. Therefore, they are supported with data warehouses, which in turn is called a hybrid blockchain platform. While several systems have been developed based on this idea, a current state-of-the-art systematic overview on the use of hybrid blockchain platforms is lacking. Therefore, a systematic literature review (SLR) study has been carried out by us to investigate the motivations for adopting them, the domains at which they were used, the adopted technologies that made this integration effective, and, finally, the challenges and possible solutions. This study shows that security, transparency, and efficiency are the top three motivations for adopting these platforms. The energy, agriculture, health, construction, manufacturing, and supply chain domains are the top domains. The most adopted technologies are cloud computing, fog computing, telecommunications, and edge computing. While there are several benefits of using hybrid blockchains, there are also several challenges reported in this study.Article Citation - Scopus: 2The Effects of Paddy Cultivation and Microbiota Members on Arsenic Accumulation in Rice Grain(Mdpi, 2023) Ersoy Omeroglu, Esra; Bayer, Asli; Sudagidan, Mert; Ozalp, Veli Cengiz; Yasa, IhsanAccess to safe food is one of the most important issues. In this context, rice plays a prominent role. Because high levels of arsenic in rice grain are a potential concern for human health, in this study, we determined the amounts of arsenic in water and soil used in the rice development stage, changes in the arsC and mcrA genes using qRT-PCR, and the abundance and diversity (with metabarcoding) of the dominant microbiota. When the rice grain and husk samples were evaluated in terms of arsenic accumulation, the highest values (1.62 ppm) were obtained from areas where groundwater was used as irrigation water, whereas the lowest values (0.21 ppm) occurred in samples from the stream. It was observed that the abundance of the Comamonadaceae family and Limnohabitans genus members was at the highest level in groundwater during grain formation. As rice development progressed, arsenic accumulated in the roots, shoots, and rice grain. Although the highest arsC values were reached in the field where groundwater was used, methane production increased in areas where surface water sources were used. In order to provide arsenic-free rice consumption, the preferred soil, water source, microbiota members, rice type, and anthropogenic inputs for use on agricultural land should be evaluated rigorously.Article Citation - WoS: 3Citation - Scopus: 3Paper-Based Aptasensor Assay for Detection of Food Adulterant Sildenafil(Mdpi, 2024) Kavruk, Murat; Ozalp, Veli CengizSildenafil is used to treat erectile dysfunction and pulmonary arterial hypertension but is often illicitly added to energy drinks and chocolates. This study introduces a lateral flow strip test using aptamers specific to sildenafil for detecting its illegal presence in food. The process involved using graphene oxide SELEX to identify high-affinity aptamers, which were then converted into molecular gate structures on mesoporous silica nanoparticles, creating a unique signaling system. This system was integrated into lateral flow chromatography strips and tested on buffers and chocolate samples containing sildenafil. The method simplifies the lateral flow assay (LFA) for small molecules and provides a tool for signal amplification. The detection limit for these strips was found to be 68.2 nM (31.8 mu g/kg) in spiked food samples.Article Citation - WoS: 10Citation - Scopus: 11Toughening Mechanism Analysis of Recycled Rubber-Based Composites Reinforced With Glass Bubbles, Glass Fibers and Alumina Fibers(Mdpi, 2021) Kabakci, Gamze Cakir; Aslan, Ozgur; Bayraktar, EminRecycling of materials attracts considerable attention around the world due to environmental and economic concerns. Recycled rubber is one of the most commonly used recyclable materials in a number of industries, including automotive and aeronautic because of their low weight and cost efficiency. In this research, devulcanized recycled rubber-based composites are designed with glass bubble microsphere, short glass fiber, aluminum chip and fine gamma alumina fiber (gamma-Al2O3) reinforcements. After the determination of the reinforcements with matrix, bending strength and fracture characteristics of the composite are investigated by three-point bending (3PB) tests. Halpin-Tsai homogenization model is adapted to the rubber-based composites to estimate the moduli of the composites. Furthermore, the relevant toughening mechanisms for the most suitable reinforcements are analyzed and stress intensity factor, K-Ic and critical energy release rate, G(Ic) in mode I are determined by 3PB test with single edge notch specimens. In addition, 3PB tests are simulated by finite element analysis and the results are compared with the experimental results. Microstructural and fracture surfaces analysis are carried out by means of scanning electron microscopy (SEM). Mechanical test results show that the reinforcement with glass bubbles, aluminum oxide ceramic fibers and aluminum chips generally increase the fracture toughness of the composites.Article Citation - WoS: 17Citation - Scopus: 24Iot Platform for Seafood Farmers and Consumers(Mdpi, 2020) Jaeger, Bjorn; Mishra, AlokThere has been a strong growth in aquatic products supported by the global seafood industry. Consumers demand information transparency to support informed decisions and to verify nutrition, food safety, and sustainable operations. Supporting these needs rests on the existence of interoperable Internet of Things (IoT) platforms for traceability that goes beyond the minimum "one up, one down" scheme required by regulators. Seafood farmers, being the source of both food and food-information, are critical to achieving the needed transparency. Traditionally, seafood farmers carry the costs of providing information, while downstream actors reap the benefits, causing limited provision of information. Now, global standards for labelling, data from IoT devices, and the reciprocity of utility from collecting data while sharing them represent great potential for farmers to generate value from traceability systems. To enable this, farmers need an IoT platform integrated with other IoT platforms in the value network. This paper presents a case study of an enterprise-level IoT platform for seafood farmers that satisfies consumers' end-to-end traceability needs while extracting data from requests for information from downstream actors.Article Citation - WoS: 17Citation - Scopus: 31Deep Learning-Based Vehicle Classification for Low Quality Images(Mdpi, 2022) Tas, Sumeyra; Sari, Ozgen; Dalveren, Yaser; Pazar, Senol; Kara, Ali; Derawi, MohammadThis study proposes a simple convolutional neural network (CNN)-based model for vehicle classification in low resolution surveillance images collected by a standard security camera installed distant from a traffic scene. In order to evaluate its effectiveness, the proposed model is tested on a new dataset containing tiny (100 x 100 pixels) and low resolution (96 dpi) vehicle images. The proposed model is then compared with well-known VGG16-based CNN models in terms of accuracy and complexity. Results indicate that although the well-known models provide higher accuracy, the proposed method offers an acceptable accuracy (92.9%) as well as a simple and lightweight solution for vehicle classification in low quality images. Thus, it is believed that this study might provide useful perception and understanding for further research on the use of standard low-cost cameras to enhance the ability of the intelligent systems such as intelligent transportation system applications.Review Citation - WoS: 7Citation - Scopus: 9A Survey of Covid-19 Diagnosis Using Routine Blood Tests With the Aid of Artificial Intelligence Techniques(Mdpi, 2023) Habashi, Soheila Abbasi; Koyuncu, Murat; Alizadehsani, RoohallahSevere Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2), causing a disease called COVID-19, is a class of acute respiratory syndrome that has considerably affected the global economy and healthcare system. This virus is diagnosed using a traditional technique known as the Reverse Transcription Polymerase Chain Reaction (RT-PCR) test. However, RT-PCR customarily outputs a lot of false-negative and incorrect results. Current works indicate that COVID-19 can also be diagnosed using imaging resolutions, including CT scans, X-rays, and blood tests. Nevertheless, X-rays and CT scans cannot always be used for patient screening because of high costs, radiation doses, and an insufficient number of devices. Therefore, there is a requirement for a less expensive and faster diagnostic model to recognize the positive and negative cases of COVID-19. Blood tests are easily performed and cost less than RT-PCR and imaging tests. Since biochemical parameters in routine blood tests vary during the COVID-19 infection, they may supply physicians with exact information about the diagnosis of COVID-19. This study reviewed some newly emerging artificial intelligence (AI)-based methods to diagnose COVID-19 using routine blood tests. We gathered information about research resources and inspected 92 articles that were carefully chosen from a variety of publishers, such as IEEE, Springer, Elsevier, and MDPI. Then, these 92 studies are classified into two tables which contain articles that use machine Learning and deep Learning models to diagnose COVID-19 while using routine blood test datasets. In these studies, for diagnosing COVID-19, Random Forest and logistic regression are the most widely used machine learning methods and the most widely used performance metrics are accuracy, sensitivity, specificity, and AUC. Finally, we conclude by discussing and analyzing these studies which use machine learning and deep learning models and routine blood test datasets for COVID-19 detection. This survey can be the starting point for a novice-/beginner-level researcher to perform on COVID-19 classification.Article Citation - WoS: 14Citation - Scopus: 25Automatic Classification of UML Class Diagrams Using Deep Learning Technique: Convolutional Neural Network(Mdpi, 2021) Gosala, Bethany; Chowdhuri, Sripriya Roy; Singh, Jyoti; Gupta, Manjari; Mishra, AlokUnified Modeling Language (UML) includes various types of diagrams that help to study, analyze, document, design, or develop any software efficiently. Therefore, UML diagrams are of great advantage for researchers, software developers, and academicians. Class diagrams are the most widely used UML diagrams for this purpose. Despite its recognition as a standard modeling language for Object-Oriented software, it is difficult to learn. Although there exist repositories that aids the users with the collection of UML diagrams, there is still much more to explore and develop in this domain. The objective of our research was to develop a tool that can automatically classify the images as UML class diagrams and non-UML class diagrams. Earlier research used Machine Learning techniques for classifying class diagrams. Thus, they are required to identify image features and investigate the impact of these features on the UML class diagrams classification problem. We developed a new approach for automatically classifying class diagrams using the approach of Convolutional Neural Network under the domain of Deep Learning. We have applied the code on Convolutional Neural Networks with and without the Regularization technique. Our tool receives JPEG/PNG/GIF/TIFF images as input and predicts whether it is a UML class diagram image or not. There is no need to tag images of class diagrams as UML class diagrams in our dataset.Article Citation - WoS: 11Citation - Scopus: 15Stress Detection Using Experience Sampling: a Systematic Mapping Study(Mdpi, 2022) Dogan, Gulin; Akbulut, Fatma Patlar; Catal, Cagatay; Mishra, AlokStress has been designated the "Health Epidemic of the 21st Century" by the World Health Organization and negatively affects the quality of individuals' lives by detracting most body systems. In today's world, different methods are used to track and measure various types of stress. Among these techniques, experience sampling is a unique method for studying everyday stress, which can affect employees' performance and even their health by threatening them emotionally and physically. The main advantage of experience sampling is that evaluating instantaneous experiences causes less memory bias than traditional retroactive measures. Further, it allows the exploration of temporal relationships in subjective experiences. The objective of this paper is to structure, analyze, and characterize the state of the art of available literature in the field of surveillance of work stress via the experience sampling method. We used the formal research methodology of systematic mapping to conduct a breadth-first review. We found 358 papers between 2010 and 2021 that are classified with respect to focus, research type, and contribution type. The resulting research landscape summarizes the opportunities and challenges of utilizing the experience sampling method on stress detection for practitioners and academics.Article Citation - WoS: 3Citation - Scopus: 4Anti-Inflammatory, Antioxidant, and Anti-Atherosclerotic Effects of Natural Supplements on Patients With Fmf-Related Aa Amyloidosis: a Non-Randomized 24-Week Open-Label Interventional Study(Mdpi, 2022) Romano, Micol; Garcia-Bournissen, Facundo; Piskin, David; Rodoplu, Ulkumen; Piskin, Lizzy; Elzagallaai, Abdelbaset A.; Demirkaya, ErkanWe aimed to evaluate the effect of a combination of natural products on parameters related to inflammation, endothelial dysfunction, and oxidative stress in a cohort of familial Mediterranean fever (FMF) patients with Serum Amyloid A amyloidosis, in a non-randomized, 24-week open-label interventional study. Morinda citrifolia (anti-atherosclerotic-AAL), omega-3 (anti-inflammatory-AIC), and extract with Alaskan blueberry (antioxidant-AOL) were given to patients with FMF-related biopsy-proven AA amyloidosis. Patients were >18 years and had proteinuria (>3500 mg/day) but a normal estimated glomerular filtration rate (eGFR). Arterial flow-mediated dilatation (FMD), carotid intima media thickness (CIMT), and serum biomarkers asymmetric dimethylarginine (ADMA), high sensitivity C-reactive protein (hs-CRP), pentraxin (PTX3), malondialdehyde (MDA), Cu/Zn-superoxide dismutase (Cu/Zn-SOD), and glutathione peroxidase (GSH-Px) were studied at baseline and after 24 weeks of treatment. A total of 67 FMF-related amyloidosis patients (52 male (77.6%); median age 36 years (range 21-66)) were enrolled. At the end of a 24-week treatment period with AAL, AIC, and AOL combination therapy, ADMA, MDA, PTX3, hsCRP, cholesterol, and proteinuria were significantly decreased compared to baseline, while CuZn-SOD, GSH-Px, and FMD levels were significantly increased. Changes in inflammatory markers PTX3, and hsCRP were negatively correlated with FMD change, and positively correlated with decreases in proteinuria, ADMA, MDA, cholesterol, and CIMT. Treatment with AAL, AIC and AOL combination for 24 weeks were significantly associated with reduction in inflammatory markers, improved endothelial functions, and oxidative state. Efficient control of these three mechanisms can have long term cardiovascular and renal benefits for patients with AA amyloidosis.
