Direct Detection of Viral Infections from Swab Samples by Probe-Gated Silica Nanoparticle-Based Lateral Flow Assay

dc.authoridTuna, Bilge Guvenc/0000-0003-1348-1336
dc.authoridÖzalp, Veli Cengiz/0000-0002-7659-5990
dc.authoridYALCINKAYA, DILARA BUSE/0000-0002-8712-2179
dc.authorscopusid57642668500
dc.authorscopusid7102693052
dc.authorscopusid57226068563
dc.authorscopusid57643402800
dc.authorscopusid6504450287
dc.authorscopusid57189699950
dc.authorwosidTuna, Bilge Guvenc/AAB-5827-2020
dc.authorwosidÖzalp, Veli Cengiz/B-2940-2009
dc.contributor.authorÖzalp, Veli Cengiz
dc.contributor.authorDogan, Soner
dc.contributor.authorTekol, Serap Demir
dc.contributor.authorCelik, Caner
dc.contributor.authorOzalp, Veli Cengiz
dc.contributor.authorTuna, Bilge Guvenc
dc.contributor.otherBasic Sciences
dc.date.accessioned2024-07-05T15:22:15Z
dc.date.available2024-07-05T15:22:15Z
dc.date.issued2024
dc.departmentAtılım Universityen_US
dc.department-temp[Durdabak, Dilara Buse; Tuna, Bilge Guvenc] Yeditepe Univ, Fac Med, Dept Biophys, TR-34755 Istanbul, Turkiye; [Dogan, Soner] Yeditepe Univ, Dept Med Biol, Fac Med, TR-34755 Istanbul, Turkiye; [Tekol, Serap Demir] Univ Hlth Sci, Kartal Dr Lutfi Kirdar City Hosp, Dept Clin Microbiol, TR-34865 Istanbul, Turkiye; [Celik, Caner] Mem Sisli Hosp, Dept Emergency Med Serv, Istanbul, Turkiye; [Ozalp, Veli Cengiz] Atilim Univ, Fac Med, Dept Med Biol, TR-06830 Ankara, Turkiyeen_US
dc.descriptionTuna, Bilge Guvenc/0000-0003-1348-1336; Özalp, Veli Cengiz/0000-0002-7659-5990; YALCINKAYA, DILARA BUSE/0000-0002-8712-2179en_US
dc.description.abstractPoint-of-care diagnosis is crucial to control the spreading of viral infections. Here, universal-modifiable probe-gated silica nanoparticles (SNPs) based lateral flow assay (LFA) is developed in the interest of the rapid and early detection of viral infections. The most superior advantage of the rapid assay is its utility in detecting various sides of the virus directly from the human swab samples and its adaptability to detect various types of viruses. For this purpose, a high concentration of fluorescein and rhodamine B as a reporting material was loaded into SNPs with excellent loading capacity and measured using standard curve, 4.19 mu mol & sdot; g-1 and 1.23 mu mol & sdot; g-1, respectively. As a model organism, severe acute respiratory syndrome coronavirus-2 (CoV-2) infections were selected by targeting its nonstructural (NSP9, NSP12) and envelope (E) genes as target sites of the virus. We showed that NSP12-gated SNPs-based LFA significantly outperformed detection of viral infection in 15 minutes from 0.73 pg & sdot; mL-1 synthetic viral solution and with a dilution of 1 : 103 of unprocessed human samples with an increasing test line intensity compared to steady state (n=12). Compared to the RT-qPCR method, the sensitivity, specificity, and accuracy of NSP12-gated SNPs were calculated as 100 %, 83 %, and 92 %, respectively. Finally, this modifiable nanoparticle system is a high-performance sensing technique that could take advantage of upcoming point-of-care testing markets for viral infection detections. Here, universal-modifiable probe-gated silica nanoparticles (SNPs) based lateral flow assay (LFA) is developed in the interest of the rapid and early detection of viral infections. The most superior advantage of the rapid assay is its utility in detecting various sides of the virus directly from the human swab samples and its adaptability to detect various types of viruses. The NSP12, NSP9, and E gene targets of CoV-2 were used as detection targets.imageen_US
dc.description.sponsorshipThis project was supported by the Turkish Academy of Sciences (GEBIP grant to Bilge Guvenc Tuna).; Turkish Academy of Sciences (GEBIP)en_US
dc.description.sponsorshipThis project was supported by the Turkish Academy of Sciences (GEBIP grant to Bilge Guvenc Tuna).en_US
dc.identifier.citation0
dc.identifier.doi10.1002/open.202300120
dc.identifier.issn2191-1363
dc.identifier.issue2en_US
dc.identifier.pmid37824210
dc.identifier.scopus2-s2.0-85173821600
dc.identifier.urihttps://doi.org/10.1002/open.202300120
dc.identifier.urihttps://hdl.handle.net/20.500.14411/2159
dc.identifier.volume13en_US
dc.identifier.wosWOS:001079467600001
dc.identifier.wosqualityQ3
dc.language.isoenen_US
dc.publisherWiley-v C H verlag Gmbhen_US
dc.relation.publicationcategoryMakale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanıen_US
dc.rightsinfo:eu-repo/semantics/openAccessen_US
dc.subjectdetection of viral infectionen_US
dc.subjectfluorescence-based LFAen_US
dc.subjectgated-SNPsen_US
dc.subjectlateral flow assayen_US
dc.subjectsilica nanoparticlesen_US
dc.titleDirect Detection of Viral Infections from Swab Samples by Probe-Gated Silica Nanoparticle-Based Lateral Flow Assayen_US
dc.typeArticleen_US
dspace.entity.typePublication
relation.isAuthorOfPublication5698576b-38e7-4cc8-9551-3e06cf62ede8
relation.isAuthorOfPublication.latestForDiscovery5698576b-38e7-4cc8-9551-3e06cf62ede8
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relation.isOrgUnitOfPublication.latestForDiscoveryc6d3b3b7-f103-4779-9789-92b2e2420f2d

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