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Article Citation - WoS: 4Citation - Scopus: 516s Bacterial Metagenomic Analysis of Herby Cheese (otlu Peynir) Microbiota(Istanbul Univ-cerrahpasa, 2021) Sudağıdan, Mert; Yurt, Mediha Nur Zafer; Taşbaşı, Behiye Büşra; Acar, Elif Esma; Ömeroğlu, Esra Ersoy; Uçak, Samet; Aydın, AliCheese microbiota may contain various bacterial species due to the use of different types of milk, rennet, and herbs. In this study, the distribution of the dominant bacteria present in the microbiota of herby cheese samples (n = 13) were examined by the next generation sequencing (NGS) technique. DNA was extracted both directly from cheese samples and after pre-enrichment. The metagenomic analysis of the NGS results revealed that Firmicutes were dominant both in DNA directly extracted from herby cheese (KOP), and pre-enriched samples (OP), at the phylum level. At the genus level, Lactobacillus, Lactococcus, and Streptococcus were dominant in the KOP samples, whereas in the OP samples, Enterococcus, Streptococcus, and Bacillus were determined as the dominant bacterial genera. Although Lactococcus raffinolactis and Streptococcus salivarius were dominant in the KOP samples, Enterococcus faecalis and S. salivarius were dominant in the OP samples. The Shannon species diversity index and principal coordinates analysis (PCoA) were used to determine the distribution in KOP and OP samples at the genus level. The PCoA of KOP-10, KOP-11, KOP-2, and KOP-7, KOP-3, and KOP-6 samples showed the wide distribution, whereas KOP-5, KOP-8, KOP-9, and KOP-14 herby cheese samples were closely related. The OP samples, especially OP-7 and OP-14, showed wide distribution in comparison to other OP samples. Finally, the dominant bacterial communities were identified by DNAbased metagenomic analysis, and this is the first report to elucidate the microbiota of herby cheese produced in Turkey using the NGS technique.Conference Object Citation - Scopus: 24-Stage Target Detection Approach in Hyperspectral Images(IEEE Computer Society, 2018) Ozdil,O.; Gunes,A.; Esin,Y.E.; Ozturk,S.; Demirel,B.Practical target detection systems require an automatic way to detect targets with high accuracy. Detection errors is not tolerable and they should be reduced as much as possible. In classical detection systems, generally single target detection algorithm is performed and the result will be evaluated according to the thresholding techniques. However, in these uncontrolled systems, false alarm rate strongly depends on the thresholding technique success. It is very hard to find a general and constant threshold value for images taken at different conditions and practical detection systems needs reliable threshold value. In this paper, we propose a new multi-stage target detection system which is the combination of different detection algorithms and thresholding technique. This system compose of 4-stages, i.e. namely 1-initial target detection (ACE, GLRT), 2-adaptive Constant False Alarm Rate (CFAR) thresholding, 3-spatially grouping, 4-statistical confidence operation. This system configuration removes the need for interactive user and it automatically implements confirmation and rejection steps. Moreover, this system can be used both for pure pixel and subpixel target detection purposes and it reduces computational processing time considerably with the implementation of consequtive processing stages. © 2018 IEEE.Article A Class of Shock Models for a System That Is Equipped With a Protection Block With an Application to Wind Turbine Reliability(Wiley, 2025) Eryilmaz, SerkanThis paper studies a class of shock models for a system that is equipped with a protection block that has its own failure rate. Under the considered class, the system exposed to shocks at random times is protected by the protection block, and the probability of the shock damaging the system varies depending on whether the protection block operates or not. The system failure criteria is defined based on the pattern of the critical/damaging shocks. Exact expressions for the reliability and mean time to failure of the system are obtained, and detailed computations are presented for the run shock model, which is included in the class. The application of the extreme shock model, which is included in the relevant class, to wind turbine reliability is also discussed.Article A Comprehensive Study of Space Efficiency in Tall Buildings: The Australian Perspective(Kauno Technologijos Universitetas, 2025) Ilgın, H.; Aslantamer, Ö.Spatial efficiency in Australian towers is shaped by a multifaceted interaction of many parameters such as architectural and structural considerations. However, there are no comprehensive studies available on space utilization in Australian high-rise towers. The article addresses this gap by investigating 32 case studies. This study aims to investigate how contemporary Australian tall buildings achieve spatial efficiency by analyzing the relationship between architectural and structural parameters and internal usable area ratios. Key findings: residential function, centrally-located core layouts, and prismatic arrangements are the most widespread trends; concrete is the favored construction material, with the shear-walled frame system being the most commonly used structural system; average space efficiency is 82%, with a core-to-GFA ratio of 16%. The paper offers valuable understandings for construction experts to inform design decisions in high-rise construction projects within the Australian context. © 2025, Kauno Technologijos Universitetas. All rights reserved.Conference Object Citation - Scopus: 3Achieving Success in Supply Chain Management Software by Agility(Springer Verlag, 2007) Mishra,D.; Mishra,A.Supply chain management is comprehensive software. Due to its scope and unpredictable, complex and unstable requirements, it is not possible to develop it with predictable development process models. Agile methodologies are targeted towards such kind of problems that involves change and uncertainty, and are adaptive rather than predictive. The aim of this paper is to analyze the management and development methodologies used in development of supply chain management software. This paper shows how to overcome risks and handicaps in each development phase of a complex inventive project. It also provides a set of guidelines regarding how the agile methods may be adopted, combined and used in these kinds of projects. © Springer-Verlag Berlin Heidelberg 2007.Article Citation - WoS: 14Citation - Scopus: 15Activation Energy of Metastable Amorphous Ge2sb2< From Room Temperature To Melt(Amer inst Physics, 2018) Muneer, Sadid; Scoggin, Jake; Dirisaglik, Faruk; Adnane, Lhacene; Cywar, Adam; Bakan, Gokhan; Gokirmak, AliResistivity of metastable amorphous Ge2Sb2Te5 (GST) measured at device level show an exponential decline with temperature matching with the steady-state thin-film resistivity measured at 858 K (melting temperature). This suggests that the free carrier activation mechanisms form a continuum in a large temperature scale (300 K - 858 K) and the metastable amorphous phase can be treated as a supercooled liquid. The effective activation energy calculated using the resistivity versus temperature data follow a parabolic behavior, with a room temperature value of 333 meV, peaking to similar to 377 meV at similar to 465 K and reaching zero at similar to 930 K, using a reference activation energy of 111 meV (3k(B)T/2) at melt. Amorphous GST is expected to behave as a p-type semiconductor at T-melt similar to 858 K and transitions from the semiconducting-liquid phase to the metallic-liquid phase at similar to 930 K at equilibrium. The simultaneous Seebeck (S) and resistivity versus temperature measurements of amorphous-fcc mixed-phase GST thin-films show linear S-T trends that meet S = 0 at 0 K, consistent with degenerate semiconductors, and the dS/dT and room temperature activation energy show a linear correlation. The single-crystal fcc is calculated to have dS/dT = 0.153 mu V/K-2 for an activation energy of zero and a Fermi level 0.16 eV below the valance band edge. (C) 2018 Author(s).Conference Object Adapting Test-Driven Development for Innovative Software Development Project(Springer Verlag, 2007) Mishra,D.; Mishra,A.In Test-Driven development, first test is made according to the customer requirement and then code is prepared to execute this test successfully. In this approach, design is not done exclusively before preparing test cases and coding. Design emerges as software evolves but this may result in lack of design quality. We adapted TDD by incorporating exclusive architectural design phase in the successful implementation of an innovative, large scale, complex project. © Springer-Verlag Berlin Heidelberg 2007.Article Citation - WoS: 15Citation - Scopus: 16Adopting of Agile Methods in Software Development Organizations: Systematic Mapping(Assoc information Communication Technology Education & Science, 2017) Abdalhamid, Samia; Mishra, AlokAdoption of agile methods in the software development organization is considered as a powerful solution to deal with the quickly changing and regularly developing business environment and fully-educated customers with constantly rising expectation, such as shorter time periods and an extraordinary level of response and service. This study investigates the adoption of agile approaches in software development organizations by using systematic mapping. Six research questions are identified, and to answer these questions a number of research papers have been reviewed in electronic databases. Finally, 25 research papers are examined and answers to all research questions are provided.Editorial Advances on Multivalued Operators and Related Fixed Point Problems(Hindawi Publishing Corporation, 2014) Chen, Chi-Ming; Karapinar, Erdal; Du, Wei-Shih; Aydi, Hassen; Romaguera, Salvador[No Abstract Available]Article Afthd: Bayesian Accelerated Failure Time Model for High-Dimensional Time-To Data(Springernature, 2025) Kumari, Pragya; Bhattacharjee, Atanu; Vishwakarma, Gajendra K.; Tank, FatihAnalyzing high-dimensional (HD) data with time-to-event outcomes poses a formidable challenge. The accelerated failure time (AFT) model, an alternative to the Cox proportional hazard model in survival analysis, lacks sufficient R packages for HD time-to-event data under the Bayesian paradigm. To address this gap, we develop the R package afthd. This tool facilitates advanced AFT modeling, offering Bayesian analysis for univariate and multivariable scenarios. This work includes diagnostic plots and an open-source R code for working with HD data, extending the conventional AFT model to the Bayesian framework of log-normal, Weibull, and log-logistic AFT models. The methodology is rigorously validated through simulation techniques, yielding consistent results across parametric AFT models. The application part is also performed on two different real HD liver cancer datasets, which reveals the proposed method's significance by obtaining inferences for survival estimates for the disease. Our developed package afthd is competent in working with HD time-to-event data using the conventional AFT model along with the Bayesian paradigm. Other aspects, like missing values in covariates within HD data and competing risk analysis, are also covered in this article.Conference Object AI Trustworthiness and Student Pilots: Exploring Attitudes, Anxieties, and Adaptation Performance(Elsevier B.V., 2025) Ceken, S.; Yilmaz, A.A.; Acar, A.B.This research explores the attitudes of student pilots toward artificial intelligence (AI) applications within the aviation sector, with a focus on their adaptation processes and potential challenges. The recent release of the "EASA AI Roadmap 2.0"by the European Union Aviation Safety Agency (EASA) underscores the growing impact of AI on aviation, driving the emergence of new business models and emphasizing a human-centric approach to AI integration within the aviation industry. This study addresses a significant gap in the literature by examining student pilots' perspectives on AI, specifically focusing on AI trustworthiness, attitudes, anxieties, and adaptation performance. The study utilizes a quantitative research approach, collecting data from 150 student pilots through surveys. Preliminary results from 106 respondents indicate varied attitudes toward AI, with significant implications for AI-supported cockpit assistant systems and the broader aviation industry. The study sample consisted of 106 (Mage = 23.6, SDage= 4.64; 79% male) student pilots from of university pilot training departments and various flight school in Turkey. Collected data were analyzed on SPSS 29. The study revealed that Sociotechnical Blindness AI anxiety is a significant predictor of general attitudes toward AI among student pilots. This finding suggests that higher levels of anxiety related to the perceived complexity and potential unintended consequences of AI are associated with more positive general attitudes toward AI. The findings emphasize the need for a human-centric approach to AI integration, highlighting the importance of trust, transparency, and adaptive training in the successful adoption of AI technologies in aviation. © 2024 The Authors. Published by ELSEVIER B.V.Book Part Citation - WoS: 1Citation - Scopus: 1An Alternative View of Ecotourism With a Specific Reference To Turkey(Springer international Publishing Ag, 2016) Erdogan, Nazmiye; Erdogan, Irfan[No Abstract Available]Article Citation - Scopus: 30Amine-Functionalized Graphene Nanosheet-Supported Pdauni Alloy Nanoparticles: Efficient Nanocatalyst for Formic Acid Dehydrogenation(Royal Society of Chemistry, 2018) Bulut,A.; Yurderi,M.; Kaya,M.; Aydemir,M.; Baysal,A.; Durap,F.; Zahmakiran,M.Formic acid (HCOOH), a major by-product of biomass processing with high energy density, stability and non-toxicity, has a great potential as a safe and a convenient liquid hydrogen (H2) storage material for combustion engines and fuel cell applications. However, high-purity hydrogen release from the catalytic decomposition of aqueous formic acid solution at desirable rates under mild conditions stands as a major challenge that needs to be solved for the practical use of formic acid in on-demand hydrogen generation systems. Described herein is a new nanocatalyst system comprised of 3-aminopropyltriethoxysilane-functionalized graphene nanosheet-supported PdAuNi alloy nanoparticles (PdAuNi/f-GNS), which can reproducibly be prepared by following double solvent method combined with liquid-phase chemical reduction, all at room temperature. PdAuNi/f-GNS selectively catalyzes the decomposition of aqueous formic acid through the dehydrogenation pathway (∼100% H2 selectivity), in the absence of any promoting additives (alkali formates, Brønsted bases, Lewis bases, etc.). PdAuNi/f-GNS nanocatalyst provides CO-free H2 generation with a turnover frequency of 1090 mol H2 mol metal−1 h−1 in the additive-free dehydrogenation of formic acid at almost complete conversion (≥92%) even at room temperature. The catalytic activity provided by PdAuNi/f-GNS nanocatalyst is higher than those obtained with the heterogeneous catalysts reported to date for the additive-free dehydrogenation of formic acid. Moreover, PdAuNi/f-GNS nanoparticles show high durability against sintering, clumping and leaching throughout the catalytic runs, so that the PdAuNi/f-GNS nanocatalyst retains almost its inherent catalytic activity and selectivity at the end of the 10th recycle. © The Royal Society of Chemistry and the Centre National de la Recherche Scientifique.Review Citation - WoS: 223Citation - Scopus: 309Analysing Global Food Waste Problem: Pinpointing the Facts and Estimating the Energy Content(de Gruyter Open Ltd, 2013) Melikoglu, Mehmet; Lin, Carol Sze Ki; Webb, ColinFood waste is a global problem. Each year food worth billions of dollars is wasted by the developed economies of the world. When food is wasted, the problem does not end at that point. More than 95% of the food waste ends at landfill sites, where converted into methane, carbon dioxide and other greenhouse gasses by anaerobic digestion. The impact of food waste to climate change is catastrophic. Food waste problem tends to increase in next 25 years due to economic and population growth mainly in Asian countries. In addition, when food wastes buried at landfill sites their energy content is lost. Although food waste is a huge problem, its global size and extent has recently become a hot topic in the academic community. This paper summarises the size of the global food waste problem together with the estimation of the amount of energy lost when food wastes dumped at landfill sites. Calculations in this study also revealed that energy lost at landfill sites equals to 43% of the delivered energy used for the preparation of foods in the US, 37% of the hydroelectric power generation of Japan, and more than 100% of the current annual renewable energy demand of UK industries.Article ANALYSING THE ALLOGRAPHIC NOTES IN THE TURKISH TRANSLATION OF AN ECOLOGICAL WORK: SILENT SPRING(Konstantin Preslavsky University of Shumen, 2024) Hastürkoǧlu,G.Paratextual elements play a crucial role in original and translated works, serving as a bridge between the creators and the recipients of the works. Analysing these elements can provide a deeper understanding of the motives of the authors, publishers, and translators. This study aims to investigate the allographic notes, specifically the translator's notes, in the Turkish translation of Silent Spring, a work that raises awareness about environmental impacts of DDT on ecology. The study also seeks to reveal, in such an ecological context, the translator's approach and motives in using footnotes categorized as factual and interpretive notes and their functions. The qualitative analysis indicates that the factual notes outnumber the interpretive notes and the main function of the translator's notes is to provide definitional and explanatory information about the ecology-related terminology which is in line with the genre of the text and the characteristics of the target readers. © 2023 Gökçen Hastürkoglu.Article Citation - WoS: 25Citation - Scopus: 28Analysis of Mirror Neuron System Activation During Action Observation Alone and Action Observation With Motor Imagery Tasks(Springer, 2018) Cengiz, Bulent; Vuralli, Doga; Zinnuroglu, Murat; Bayer, Gozde; Golmohammadzadeh, Hassan; Gunendi, Zafer; Arikan, Kutluk BilgeThis study aimed to explore the relationship between action observation (AO)-related corticomotor excitability changes and phases of observed action and to explore the effects of pure AO and concurrent AO and motor imagery (MI) state on corticomotor excitability using TMS. It was also investigated whether the mirror neuron system activity is muscle-specific. Fourteen healthy volunteers were enrolled in the study. EMG recordings were taken from the right first dorsal interosseous and the abductor digiti minimi muscles. There was a significant main effect of TMS timing (after the beginning of the movement, at the beginning of motor output state, and during black screen) on the mean motor evoked potential (MEP) amplitude. Mean MEP amplitudes for AO combined with MI were significantly higher than pure AO session. There was a significant interaction between session and TMS timing. There was no significant main effect of muscle on MEP amplitude. The results indicate that corticomotor excitability is modulated by different phases of the observed motor movement and this modulation is not muscle-specific. Simultaneous MI and AO enhance corticomotor excitability significantly compared to pure AO.Article Citation - WoS: 5Citation - Scopus: 6Analysis of the Effect of Propellant Temperature on Interior Ballistics Problem(Yildiz Technical Univ, 2018) Evci, C.; Isik, H.This study investigates the effect of conditioning temperature of double base propellants on the interior ballistic parameters such as burning gas temperature, barrel wall temperature, pressure and stresses generated in the barrel. Interior ballistic problem was solved employing experimental, numerical and analytical methods with a thermo-mechanical approach. Double base propellants were conditioned at different temperatures ( 52, 35, 21, 0, -20, -35, -54 degrees C). The maximum pressure in the barrel and projectile muzzle velocity were measured for all the propellants by conducting shooting tests with a special test barrel using 7.62x51 mm NATO ammunition. Vallier-Heydenreich method was employed to determine the transient pressure distribution along the barrel. The temperature of burnt gases was calculated by using Noble-Abel equation. The heat transfer analysis was done using the commercial software ANSYS to get the transient temperature and stress distributions. Temperature distribution through the barrel wall thickness was validated using a FLIR thermal imager. Radial, circumferential and axial stresses and corresponding equivalent Von Misses stresses were determined numerically and analytically. The results of the analytical solution for stress analysis validated the finite element solution of interior ballistic problem. Increasing the initial temperature of the propellant resulted in higher temperature and pressure inside the barrel which in turn increased the stresses in the barrel.Article Citation - WoS: 3Citation - Scopus: 2Analysis of the Industrial Heritage in Zonguldak and Recommendations for Its Reutilization(Univ Alexandru Ioan Cuza Iasi, Arheoinvest interdisciplinary Platform, 2021) Fidan, Fuat; Önür, Selahattin; Onur, Selahattin; Önür, Selahattin; Architecture; Architecture; ArchitectureSignificant changes and transformations took place in the structure of societies and cities with the Industrial Revolution besides technological developments. During this period, industrial cities and industrial societies emerged as a result of the settlements that developed near the mines opened to increase production. A similar process took place in Zonguldak; the coal mines in the region allowed it to be established and developed as a port city in 1849. There are industrial structures and facilities in the city that have remained dysfunctional over time. These industrial values, which gained identity to the city and region where they are located, need to be conserved as a heritage. The aim of the study was to analyze, discuss, and develop recommendations for the current state of this industrial heritage. In this context, first, the industrialization process in the city was examined and the urban effects of the coal industry and its role in the development of other industries were revealed. Then, the status of the industrial heritage and the current ideas and approaches regarding this heritage were determined through different industrial building/facility/campus examples in Zonguldak. At this point, recommendations for conservation and recovery of these values in the city have been made.Article The Analysis of the Silhouette Alteration in Ottoman Women's Dresses (entari) From Classical To Modern Period(Milli Folklor dergisi, 2019) Cegindir, Nese Yasar; Kuru, Songul; Textile and Fashion DesignThe main objective of this article is to review the change of silhouette in women's entari varying from classical to modern period in the Ottoman Empire by use of visual sources. The study is deemed important because it maintains preserves and introduces "the change in the regular wear of women of middle and upper socio-culturalleconomic group in the Ottoman Empire" into the national and international literature, contributes to region-scaled cultural heritage and constitutes a scientific source for those who are interested in this subject. Materials of the descriptive study are as follows: printed and on-line documents regarding clothing culture of the Ottoman Empire, especially from the rise of the Empire forward, itineraries of local and foreign voyagers, engravings, miniatures and photos of clothes in the collections of museums. The samples of the study are eight photos chosen on purpose since they reflect the change of clothing silhouette in the best possible way. Visual materials chosen have been converted into graphical silhouette by use of the Macromedia Free Hand MXa programme. Details of each clothing silhouette were analyzed by comparison with preceding one by use of the visual analysis techniques. The change of silhouettes in comparison with preceding one has been examined within the frame of alphabetic that constitutes the fashion literature and silhouettes of women's clothing. Data acquired from each photograph were sorted chronologically and interpreted by combining with alphabetical silhouettes and graphics which were formed alongside clothing silhouette characteristics. Three-step change in women's entari has been observed as a result of the study. H-shaped silhouette of entari, which is simple, plain and without detail and taken over from the Seljug Empire, interacted with the Europe thanks to improvement of cultural relations with the Europe following the transition to the settled life. In this process, thanks to the technics of new cut, merging, forming and fixating the form, entaris fitting the body all the better have turned into X silhouette. As of the Tanzimat Reform Era, fashion concept was adopted and entari of intellectual Ottoman women transformed into S-silhouette which was formed by Western women by use of artificial tools.Article Citation - Scopus: 1Analyzing Students' Academic Success in Pre-requisite Course Chains: A Case Study in Turkey(Tempus Publications, 2018) Karakaya, Murat; Eryilmaz, Meltem; Ceyhan, Ulas; Computer EngineeringThere are several principles which have been accepted as approaches to successful curriculum development. In spite of the differences in the proposed sequencing of topics, all approaches basically depend on the pre-requisite chains to implement their educational approach in the curriculum development for specifying the order of the subjects. In this research, two prerequisite chains representing two different curriculum development approaches are taken into consideration in a case study. The first research question considered is whether academic success in a follow-up course is positively related to success attained in the pre-requisite course. The second one is whether or not the selected curriculum development approach for deciding the chains has a significant impact on the academic success relationships between a pre-requisite and its follow-up course. To answer these questions, course data of 441 undergraduate students who graduated from the Atilim University between Fall 2001 and Spring 2015 semesters were collected and analyzed. The results indicate that the succes levels gained in a pre-requisite and its follow-up course are corelated. Moreover, different cirriculum development methods can affect this corelation. Thus, cirriculum developers should consider appropriate approaches to improve student success for deciding chaining courses and their contents.
