Determination of bacterial community structure of Turkish kefir beverages via metagenomic approach
dc.authorid | Özalp, Veli Cengiz/0000-0002-7659-5990 | |
dc.authorid | Acar, Elif Esma/0000-0002-6264-7550 | |
dc.authorid | UCAK, SAMET/0000-0002-3461-2481 | |
dc.authorscopusid | 55788627100 | |
dc.authorscopusid | 57209077519 | |
dc.authorscopusid | 57211080335 | |
dc.authorscopusid | 57211791524 | |
dc.authorscopusid | 57210728135 | |
dc.authorscopusid | 57211084286 | |
dc.authorscopusid | 6504450287 | |
dc.authorwosid | Özalp, Veli Cengiz/B-2940-2009 | |
dc.contributor.author | Yegin, Zeynep | |
dc.contributor.author | Yurt, Mediha Nur Zafer | |
dc.contributor.author | Tasbasi, Behiye Busra | |
dc.contributor.author | Acar, Elif Esma | |
dc.contributor.author | Altunbas, Osman | |
dc.contributor.author | Ucak, Samet | |
dc.contributor.author | Sudagidan, Mert | |
dc.date.accessioned | 2024-07-05T15:18:34Z | |
dc.date.available | 2024-07-05T15:18:34Z | |
dc.date.issued | 2022 | |
dc.department | Atılım University | en_US |
dc.department-temp | [Yegin, Zeynep] Sinop Univ, Vocat Sch Hlth Serv, Med Lab Tech Program, TR-57000 Sinop, Turkey; [Yurt, Mediha Nur Zafer; Tasbasi, Behiye Busra; Acar, Elif Esma; Sudagidan, Mert] Konya Food & Agr Univ, KIT ARGEM R&D Ctr, TR-42080 Meram, Konya, Turkey; [Tasbasi, Behiye Busra] BBT Biotechnol, InnoPk, TR-42250 Selcuklu, Konya, Turkey; [Altunbas, Osman] Konya Food & Agr Univ, SARGEM, TR-42080 Meram, Konya, Turkey; [Ucak, Samet] Istanbul Aydin Univ, Fac Med, Dept Med Biol & Genet, TR-34295 Istanbul, Turkey; [Ozalp, Veli Cengiz] Atilim Univ, Fac Med, Dept Med Biol, TR-06830 Ankara, Turkey | en_US |
dc.description | Özalp, Veli Cengiz/0000-0002-7659-5990; Acar, Elif Esma/0000-0002-6264-7550; UCAK, SAMET/0000-0002-3461-2481 | en_US |
dc.description.abstract | Bacterial microbiota of industrially produced kefir beverages (n:33) consumed in Turkey was studied using a culture-independent method and a metagenomic approach. DNA extraction from non pre enriched and pre-enriched kefir samples was used for 16S rRNA amplicon sequencing. Kefirs were dominated by Firmicutes, followed by Actinobacteria and Proteobacteria phyla. The most abundant genera in non pre-enriched kefir beverages were Lactococcus followed by Streptococcus, Bifidobacterium, Lactobacillus, and Leuconostoc. Pre-enriched kefirs were dominated by Streptococcus followed by Lactobacillus, Lactococcus, Bifidobacterium, and Leuconostoc at the genus level. Psychroserpens, Desulfonispora, Pediococcus, Micromonospora, Fructobacillus, Mycobacterium, Acetobacter, Pseudopedobacter, and Clostridium XI genera were found only in pre-enriched kefirs. Kefirs displayed pH differences from 4.04 to 4.49 and the acidity was 0.617e0.987. In two samples, the lowest pH values were obtained with abundance of Lactobacillus helveticus and Streptococcus salivarius. This study broadens our viewpoint and strengthens future applications of kefir beverages in industrial and medical fields. (C)& nbsp;2022 Elsevier Ltd. All rights reserved. | en_US |
dc.description.sponsorship | BioProject [PRJNA764873] | en_US |
dc.description.sponsorship | The authors would like to thank Kit-ARGEM R&D Center Konya Food and Agriculture University for providing lab facilities. This research did not receive any specific grant from funding agencies in the public, commercial, or not-for-profit sectors. The bacterial 16S rRNA gene amplicon sequencing data generated in this study using NGS was submitted to NCBI Sequence Read Archive (SRA) database with BioProject accession number PRJNA764873. | en_US |
dc.identifier.citation | 11 | |
dc.identifier.doi | 10.1016/j.idairyj.2022.105337 | |
dc.identifier.issn | 0958-6946 | |
dc.identifier.issn | 1879-0143 | |
dc.identifier.scopus | 2-s2.0-85125942069 | |
dc.identifier.uri | https://doi.org/10.1016/j.idairyj.2022.105337 | |
dc.identifier.uri | https://hdl.handle.net/20.500.14411/1861 | |
dc.identifier.volume | 129 | en_US |
dc.identifier.wos | WOS:000793271400018 | |
dc.identifier.wosquality | Q2 | |
dc.language.iso | en | en_US |
dc.publisher | Elsevier Sci Ltd | en_US |
dc.relation.publicationcategory | Makale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanı | en_US |
dc.rights | info:eu-repo/semantics/closedAccess | en_US |
dc.subject | [No Keyword Available] | en_US |
dc.title | Determination of bacterial community structure of Turkish kefir beverages via metagenomic approach | en_US |
dc.type | Article | en_US |
dspace.entity.type | Publication |