Microfluidic Rapid Isolation and Electrochemical Detection of S. Pneumonia Via Aptamer-Decorated Surfaces

dc.contributor.author Babaie, Zahra
dc.contributor.author Kibar, Gunes
dc.contributor.author Yesilkaya, Hasan
dc.contributor.author Amrani, Yassine
dc.contributor.author Dogan, Soner
dc.contributor.author Tuna, Bilge G.
dc.contributor.author Cetin, Barbaros
dc.contributor.author Özalp, Veli Cengiz
dc.date.accessioned 2025-03-05T20:47:02Z
dc.date.available 2025-03-05T20:47:02Z
dc.date.issued 2025
dc.description.abstract Background: S. pneumoniae is widely recognized as a leading cause of respiratory infections worldwide, often resulting in high mortality rates. However, the advent of microfluidic technologies has brought significant advancements, including the simplified, sensitive, cost-effective, and rapid approach to pneumococcal bacteremia detection. In this study, a microfluidic magnetic platform is presented for rapid isolation, and an electrode array is utilized for the electrochemical detection of S. pneumoniae. Aptamer-decorated surfaces were employed for both isolation and detection. For isolation, silica magnetic microparticles were synthesized and decorated with aptamer. Results: Isolation performance was assessed for phosphate-buffered saline (PBS) and blood samples for different concentrations of S. pneumoniae. Electrical impedance spectroscopy (EIS) with fabricated gold interdigitated electrodes (IDEs) decorated with aptamer was implemented for the detection of S. pneumoniae at different bacteria concentrations. The microfluidic platform performed bacteria isolation at comparable isolation efficiency with batch systems but at a much faster rate (isolation took about a minute, and the aptamer-decorated electrode array exhibited a limit of detection (LOD) at 962 CFU/mL and linear range between 104 and 107CFU/mL. Significance: Our method represents a significant advancement compared to previous reports. Our microfluidic platform can efficiently isolate 60 mu L of the bacteria sample within about one minute. The entire process takes about two minutes including the detection step. Furthermore, our method achieves a notable improvement in the detection limit for S. pneumoniae compared to conventional ELISA and magnetic microfluidics ELISA. en_US
dc.description.sponsorship Katip Celebi-Newton Fund Industry Academy Partnership Program of the Scientific and Technical Research Council of Turkiye; Royal Academy of Engineering, United Kingdom [220N316] en_US
dc.description.sponsorship This study is financially supported by Katip Celebi-Newton Fund Industry Academy Partnership Program of the Scientific and Technical Research Council of Turkiye and Royal Academy of Engineering, United Kingdom under Grant No. 220N316. en_US
dc.identifier.doi 10.1016/j.aca.2025.343726
dc.identifier.issn 0003-2670
dc.identifier.issn 1873-4324
dc.identifier.scopus 2-s2.0-85216804660
dc.identifier.uri https://doi.org/10.1016/j.aca.2025.343726
dc.identifier.uri https://hdl.handle.net/20.500.14411/10462
dc.language.iso en en_US
dc.publisher Elsevier en_US
dc.rights info:eu-repo/semantics/closedAccess en_US
dc.subject Microfluidics en_US
dc.subject Biosensor en_US
dc.subject Bacteria Isolation en_US
dc.subject Bacteria Detection en_US
dc.subject Aptamer en_US
dc.title Microfluidic Rapid Isolation and Electrochemical Detection of S. Pneumonia Via Aptamer-Decorated Surfaces en_US
dc.type Article en_US
dspace.entity.type Publication
gdc.author.scopusid 58997198900
gdc.author.scopusid 35100535600
gdc.author.scopusid 6506993506
gdc.author.scopusid 7003591764
gdc.author.scopusid 7102693052
gdc.author.scopusid 57189699950
gdc.author.scopusid 6504450287
gdc.coar.access metadata only access
gdc.coar.type text::journal::journal article
gdc.description.department Atılım University en_US
gdc.description.departmenttemp [Babaie, Zahra; Kibar, Gunes; Cetin, Barbaros] ID Bilkent Univ, Dept Mech Eng, Microfluid & Lab On A Chip Res Grp, TR-06800 Ankara, Turkiye; [Babaie, Zahra; Kibar, Gunes; Cetin, Barbaros] UNAM, Natl Nanotech Res Ctr, TR-06800 Ankara, Turkiye; [Babaie, Zahra; Kibar, Gunes; Cetin, Barbaros] ID Bilkent Univ, Inst Mat Sci & Nanotech, TR-06800 Ankara, Turkiye; [Kibar, Gunes] Adana Alparslan Turkes Sci & Technol Univ, Mat Sci & Engn Dept, Micro Nano Particles MNP Res Grp, TR-01250 Adana, Turkiye; [Yesilkaya, Hasan; Amrani, Yassine] Univ Leicester, Dept Resp Sci, Univ Rd, Leicester LE1 7RH, England; [Dogan, Soner] Yeditepe Univ, Sch Med, Dept Med Biol, TR-34755 Istanbul, Turkiye; [Tuna, Bilge G.] Yeditepe Univ, Sch Med, Dept Med Biophys, TR-34755 Istanbul, Turkiye; [Ozalp, Veli C.] Atilim Univ, Sch Med, Dept Med Biol, TR-06830 Ankara, Turkiye en_US
gdc.description.publicationcategory Makale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanı en_US
gdc.description.scopusquality Q1
gdc.description.volume 1345 en_US
gdc.description.woscitationindex Science Citation Index Expanded
gdc.description.wosquality Q1
gdc.identifier.wos WOS:001423352500001
gdc.scopus.citedcount 2
gdc.wos.citedcount 0

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