Microfluidic Rapid Isolation and Electrochemical Detection of S. Pneumonia Via Aptamer-Decorated Surfaces

dc.authorscopusid58997198900
dc.authorscopusid35100535600
dc.authorscopusid6506993506
dc.authorscopusid7003591764
dc.authorscopusid7102693052
dc.authorscopusid57189699950
dc.authorscopusid6504450287
dc.contributor.authorBabaie, Zahra
dc.contributor.authorKibar, Gunes
dc.contributor.authorYesilkaya, Hasan
dc.contributor.authorAmrani, Yassine
dc.contributor.authorDogan, Soner
dc.contributor.authorTuna, Bilge G.
dc.contributor.authorCetin, Barbaros
dc.contributor.authorÖzalp, Veli Cengiz
dc.date.accessioned2025-03-05T20:47:02Z
dc.date.available2025-03-05T20:47:02Z
dc.date.issued2025
dc.departmentAtılım Universityen_US
dc.department-temp[Babaie, Zahra; Kibar, Gunes; Cetin, Barbaros] ID Bilkent Univ, Dept Mech Eng, Microfluid & Lab On A Chip Res Grp, TR-06800 Ankara, Turkiye; [Babaie, Zahra; Kibar, Gunes; Cetin, Barbaros] UNAM, Natl Nanotech Res Ctr, TR-06800 Ankara, Turkiye; [Babaie, Zahra; Kibar, Gunes; Cetin, Barbaros] ID Bilkent Univ, Inst Mat Sci & Nanotech, TR-06800 Ankara, Turkiye; [Kibar, Gunes] Adana Alparslan Turkes Sci & Technol Univ, Mat Sci & Engn Dept, Micro Nano Particles MNP Res Grp, TR-01250 Adana, Turkiye; [Yesilkaya, Hasan; Amrani, Yassine] Univ Leicester, Dept Resp Sci, Univ Rd, Leicester LE1 7RH, England; [Dogan, Soner] Yeditepe Univ, Sch Med, Dept Med Biol, TR-34755 Istanbul, Turkiye; [Tuna, Bilge G.] Yeditepe Univ, Sch Med, Dept Med Biophys, TR-34755 Istanbul, Turkiye; [Ozalp, Veli C.] Atilim Univ, Sch Med, Dept Med Biol, TR-06830 Ankara, Turkiyeen_US
dc.description.abstractBackground: S. pneumoniae is widely recognized as a leading cause of respiratory infections worldwide, often resulting in high mortality rates. However, the advent of microfluidic technologies has brought significant advancements, including the simplified, sensitive, cost-effective, and rapid approach to pneumococcal bacteremia detection. In this study, a microfluidic magnetic platform is presented for rapid isolation, and an electrode array is utilized for the electrochemical detection of S. pneumoniae. Aptamer-decorated surfaces were employed for both isolation and detection. For isolation, silica magnetic microparticles were synthesized and decorated with aptamer. Results: Isolation performance was assessed for phosphate-buffered saline (PBS) and blood samples for different concentrations of S. pneumoniae. Electrical impedance spectroscopy (EIS) with fabricated gold interdigitated electrodes (IDEs) decorated with aptamer was implemented for the detection of S. pneumoniae at different bacteria concentrations. The microfluidic platform performed bacteria isolation at comparable isolation efficiency with batch systems but at a much faster rate (isolation took about a minute, and the aptamer-decorated electrode array exhibited a limit of detection (LOD) at 962 CFU/mL and linear range between 104 and 107CFU/mL. Significance: Our method represents a significant advancement compared to previous reports. Our microfluidic platform can efficiently isolate 60 mu L of the bacteria sample within about one minute. The entire process takes about two minutes including the detection step. Furthermore, our method achieves a notable improvement in the detection limit for S. pneumoniae compared to conventional ELISA and magnetic microfluidics ELISA.en_US
dc.description.sponsorshipKatip Celebi-Newton Fund Industry Academy Partnership Program of the Scientific and Technical Research Council of Turkiye; Royal Academy of Engineering, United Kingdom [220N316]en_US
dc.description.sponsorshipThis study is financially supported by Katip Celebi-Newton Fund Industry Academy Partnership Program of the Scientific and Technical Research Council of Turkiye and Royal Academy of Engineering, United Kingdom under Grant No. 220N316.en_US
dc.description.woscitationindexScience Citation Index Expanded
dc.identifier.doi10.1016/j.aca.2025.343726
dc.identifier.issn0003-2670
dc.identifier.issn1873-4324
dc.identifier.scopus2-s2.0-85216804660
dc.identifier.scopusqualityQ1
dc.identifier.urihttps://doi.org/10.1016/j.aca.2025.343726
dc.identifier.urihttps://hdl.handle.net/20.500.14411/10462
dc.identifier.volume1345en_US
dc.identifier.wosWOS:001423352500001
dc.identifier.wosqualityQ1
dc.language.isoenen_US
dc.publisherElsevieren_US
dc.relation.publicationcategoryMakale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanıen_US
dc.rightsinfo:eu-repo/semantics/closedAccessen_US
dc.scopus.citedbyCount0
dc.subjectMicrofluidicsen_US
dc.subjectBiosensoren_US
dc.subjectBacteria Isolationen_US
dc.subjectBacteria Detectionen_US
dc.subjectAptameren_US
dc.titleMicrofluidic Rapid Isolation and Electrochemical Detection of S. Pneumonia Via Aptamer-Decorated Surfacesen_US
dc.typeArticleen_US
dc.wos.citedbyCount0
dspace.entity.typePublication

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