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Article Citation - WoS: 4Citation - Scopus: 516s Bacterial Metagenomic Analysis of Herby Cheese (otlu Peynir) Microbiota(Istanbul Univ-cerrahpasa, 2021) Sudağıdan, Mert; Yurt, Mediha Nur Zafer; Taşbaşı, Behiye Büşra; Acar, Elif Esma; Ömeroğlu, Esra Ersoy; Uçak, Samet; Aydın, Ali; Ozalp, Cengiz; Ersoy Omeroglu, Esra; Mediha Nur, Zafer YURTCheese microbiota may contain various bacterial species due to the use of different types of milk, rennet, and herbs. In this study, the distribution of the dominant bacteria present in the microbiota of herby cheese samples (n = 13) were examined by the next generation sequencing (NGS) technique. DNA was extracted both directly from cheese samples and after pre-enrichment. The metagenomic analysis of the NGS results revealed that Firmicutes were dominant both in DNA directly extracted from herby cheese (KOP), and pre-enriched samples (OP), at the phylum level. At the genus level, Lactobacillus, Lactococcus, and Streptococcus were dominant in the KOP samples, whereas in the OP samples, Enterococcus, Streptococcus, and Bacillus were determined as the dominant bacterial genera. Although Lactococcus raffinolactis and Streptococcus salivarius were dominant in the KOP samples, Enterococcus faecalis and S. salivarius were dominant in the OP samples. The Shannon species diversity index and principal coordinates analysis (PCoA) were used to determine the distribution in KOP and OP samples at the genus level. The PCoA of KOP-10, KOP-11, KOP-2, and KOP-7, KOP-3, and KOP-6 samples showed the wide distribution, whereas KOP-5, KOP-8, KOP-9, and KOP-14 herby cheese samples were closely related. The OP samples, especially OP-7 and OP-14, showed wide distribution in comparison to other OP samples. Finally, the dominant bacterial communities were identified by DNAbased metagenomic analysis, and this is the first report to elucidate the microbiota of herby cheese produced in Turkey using the NGS technique.Article 19. Yüzyılda Osmanlı ve Rus İmparatorluklarında Yerel Yönetim Reformu: 1864 Zemstvo Kanunu ve 1864 Vilayet Nizamnamesi Üzerine Karşılaştırmalı Bir Analiz(2022) Gülseven, Aslı YiğıtOsmanlı ve Rus İmparatorluklarının 19. yüzyılına damga vuran modernleşme süreci her iki devlette de kapsamlı bir reform hareketi başlatmıştı. 19. yüzyılın ortasında patlak veren Kırım Harbi neticesinde, Avrupalı devletlerin baskı ve müdahalelerinden çekinen her iki imparatorlukta da iktisadi refahın sağlanması yolunda idari düzenlemelerin ya-pılması öncelikli hedef haline gelmişti. Buradan hareketle, Osmanlı ve Rus İmparator-luklarında 19. yüzyılda etkin yönetim anlayışı çerçevesinde yerel yönetimlerde bir takım idari düzenlemeler meydana getirildi. Bir yandan yerel yönetimlerin faaliyet ve yetki alanlarının genişletilmesi anlayışı benimsenirken, diğer yandan her iki imparatorlukta da merkezi yönetimin güçlendirilmesi hedeflenmiştir. Bu çalışma, Osmanlı İmparatorlu-ğunda 1864 Vilayet Nizamnamesi ve Rus İmparatorluğunda 1864 Zemstvo Kanununun taşra örgütlenmesine getirdikleri yerel yönetim reformunu ortaya koymayı ve her iki dü-zenlemeyi tarihsel arka plan, içerik, kapsam ve etkinlik yönünden karşılaştırmalı olarak değerlendirmeyi amaçlamaktadır.Article Citation - WoS: 14Citation - Scopus: 16Activation Energy of Metastable Amorphous Ge2sb2< From Room Temperature To Melt(Amer inst Physics, 2018) Muneer, Sadid; Scoggin, Jake; Dirisaglik, Faruk; Adnane, Lhacene; Cywar, Adam; Bakan, Gokhan; Gokirmak, AliResistivity of metastable amorphous Ge2Sb2Te5 (GST) measured at device level show an exponential decline with temperature matching with the steady-state thin-film resistivity measured at 858 K (melting temperature). This suggests that the free carrier activation mechanisms form a continuum in a large temperature scale (300 K - 858 K) and the metastable amorphous phase can be treated as a supercooled liquid. The effective activation energy calculated using the resistivity versus temperature data follow a parabolic behavior, with a room temperature value of 333 meV, peaking to similar to 377 meV at similar to 465 K and reaching zero at similar to 930 K, using a reference activation energy of 111 meV (3k(B)T/2) at melt. Amorphous GST is expected to behave as a p-type semiconductor at T-melt similar to 858 K and transitions from the semiconducting-liquid phase to the metallic-liquid phase at similar to 930 K at equilibrium. The simultaneous Seebeck (S) and resistivity versus temperature measurements of amorphous-fcc mixed-phase GST thin-films show linear S-T trends that meet S = 0 at 0 K, consistent with degenerate semiconductors, and the dS/dT and room temperature activation energy show a linear correlation. The single-crystal fcc is calculated to have dS/dT = 0.153 mu V/K-2 for an activation energy of zero and a Fermi level 0.16 eV below the valance band edge. (C) 2018 Author(s).Article Citation - WoS: 16Citation - Scopus: 17Adopting of Agile Methods in Software Development Organizations: Systematic Mapping(Assoc information Communication Technology Education & Science, 2017) Abdalhamid, Samia; Mishra, AlokAdoption of agile methods in the software development organization is considered as a powerful solution to deal with the quickly changing and regularly developing business environment and fully-educated customers with constantly rising expectation, such as shorter time periods and an extraordinary level of response and service. This study investigates the adoption of agile approaches in software development organizations by using systematic mapping. Six research questions are identified, and to answer these questions a number of research papers have been reviewed in electronic databases. Finally, 25 research papers are examined and answers to all research questions are provided.Article Citation - WoS: 28Citation - Scopus: 37Agile Project Management Tools: a Brief Comprative View(inst information & Communication Technologies-bulgarian Acad Sciences, 2019) Ozkan, Deniz; Mishra, AlokAgile methodologies are becoming popular in software development. Managers are required to understand project's progress and product quality without development documents. During Agile practices of the teams and organizations, Agile project management tools are frequently used. The use of such tools leads to achieving speed and efficiency, affects the quality of the software. The quality of final product is mostly related with to project management. Accordingly, the paper provides brief comparative perspective about the popular project management tools for agile projects. 16 popular Agile project management tools have been presented helping agile developers to plan and manage their tasks in an efficient manner. Taiga, Axosoft, Agielan, Planbox are more appropriate for start-up projects. The most twitted and most appreciated tools are reported as Jira, Trello, and VersionOne. SpiraTeam by Inflectra and Pivotal Tracker are other pricing and popular agile tools, providing flexibility to Agile developers and increase collaboration among team members.Review Citation - WoS: 3Citation - Scopus: 4Akciğer Kanserinde İmmünoterapi ve Tedavide Multidisipliner Yaklaşım(Turkish Assoc Tuberculosis & Thorax, 2020) Karadurmuş, Nuri; Kaya, Akın; Göksel, Tuncay; Yılmaz, Ülkü; Tülek, NeclaAkciğer kanseri dünya genelinde kanserle ilişkili ölümlerin başlıca nedeniolmaya devam etmektedir. Son 20 yılda kanser biyolojisi ve patogenezi hakkındaki bilgiler artmış, immün kontrol noktası inhibitörleri (İKNİ) kullanımasunulmuş ve böylece solid kanserlerin tedavisinde önemli bir dönem başlamıştır. Bu derlemede; tedavide yenilikler, immünoterapi ve tedavide multidisipliner yaklaşım çerçevesinde akciğer kanseri ele alınmıştır. Küçük hücreli dışıakciğer kanseri (KHDAK) en sık görülen ve özellikleri nedeniyle İKNİ tedavisinden ideal olarak yararlanabilecek akciğer kanseri türü olması nedeniyleyazının odak noktasını oluşturmuştur. Bu derleme, akciğer kanseri tedavisindeimmünoterapi yaklaşımının göğüs hastalıkları başta olmak üzere tüm branşlarda multidisipliner farkındalığını artırmayı ve yönetimi hakkında bilgi sağlamayıamaçlayan ilk Türkçe derlemedir. Ayrıca bu derleme, KHDAK tedavisinde İKNİkullanımına ilişkin son klinik çalışmaların dikkat çekici sonuçlarını sunmasıaçısından önem teşkil etmektedir. İmmünoterapi kanser tedavisinde yeni bir dönem başlatmıştır ve İKNİ tedavisinin kendine özgü etki mekanizması yeni bazı advers olay grubunun ortaya çıkmasına nedenolmuştur, bunlar arasında pnömonitis özellikle önemlidir ve advers olaylar konusunda gerektiğinde hastaların ilgili uzmanlık dalları ilekonsülte edilmesi gerekmektedir. Akciğer kanserinde tedavi, hastanın özellikleri, histolojik özellikler, genetik durum göz önünde bulundurularak her bir hastaya özel planlanmalı ve akciğer kanserli bir hastanın tanısal değerlendirilmesi ve en uygun şekilde tedavisi içingöğüs hastalıkları, göğüs cerrahisi, tıbbi onkoloji, radyasyon onkolojisi, patoloji ve radyoloji uzmanlık dalları arasında işbirliği sağlanmalıdır. Bununla birlikte, aile hekimleri de akciğer kanserinin erken tanınmasında ve ayrıca hastalarını tütün bırakmayı teşvik ederekkanserin önlenmesinde önemli rol oynayabilirler. Ayrıca, toplumda farkındalık yaratmak ve erken tanı için akciğer kanseri yönündentarama çalışmaları yapmak hedeflenmelidirArticle Altının Riskten Korunma Etkinliği: Farklı Dinamik Portföy Yaklaşımları İle Bankacılık Sektörü İçin Bir Analiz(Economic and Financial Research Assoc - EFAD, 2022) Ozdemir, HuseyinBu çalışmada minimum varyans, minimum korelasyon ve minimum bağlantılılık yaklaşımları ile altın ve altı büyük bankanın (İş Bankası, Garanti Bankası, Akbank, Yapı Kredi Bankası, Halkbank ve Vakıfbank) hisse senedinden oluşan portföyün finansal analizi yapılmıştır. Çalışmanın amacı altının Türkiye’de faaliyet gösteren altı büyük banka hisse senetlerine karşı finansal koruma sağlayıp sağlamadığının araştırılmasıdır. Ayrıca bu çalışmada altının finansal koruma etkinliğinin ölçülmesi de amaçlanmıştır. Analiz edilen veriler günlük frekansta olup gözlem dönemi 01.01.2018- 08.11.2022 arasını içermektedir. Çalışma kapsamında kullanılan portföy oluşturma yaklaşımı TVP-VAR modelinden elde edilmiştir. Ampirik sonuçlar, zamana ve portföy oluşturma yaklaşımına bağlı olarak altının banka hisse senetleri içindeki optimal oranının %39 ile %53 oranında değiştiğini göstermektedir. Oluşturulan portföylerde söz konusu bankaların hisse senedi oynaklıklarının yaklaşık %75 oranında azaldığı gözlemlenmiştir. MCP ve MCoP yaklaşımları ile karşılaştırdığında en yüksek kümülatif getirinin olduğu yaklaşım MVP yaklaşımıdır. Ayrıca, çalışma kapsamında elde edilen bulgular altının ayı piyasasında banka hisse senetleri için iyi bir finansal koruma sağladığını göstermektedir.Article Analysing the Views of School of Foreignlanguages Instructors About Organizationalculture(Ani Publishing, 2021) Akman, Devrim; Koşar, DidemThis study aims to investigate the views of school of foreignlanguages instructors about organizational culture. The study is designed inqualitative research method and as a case study. The study was conductedwith 15 school of foreign languages instructors who were selected bymaximum variation sampling method during the 2018 and 2019 academicyear in Ankara. Semi structured interviews were conducted to gather dataand content analysis was used to analyse the data. The study emphasisesthat for the powerful school culture, instructors should focus on orientation,social activities, merit, and democratic management style.Article An Analysis of Academic Performance: Could Family Income and Medium of Instruction Be Determinants?(2013) Cılasun, Seyit MüminÖğrencilerin üniversitedeki akademik performansları üzerine oldukça eskiye dayanan yoğun bir literatür bulunmaktadır. Ancak gelişmekte olan ülkelere baktığımızda bu alanda yapılmış yeterli sayıda çalışma bulunmamaktadır. Bu çalışmada Atılım Üniversitesindeki işletme bölümü öğrencilerinin CGPAlerini belirleyen faktörler, özellikle de ailenin gelir düzeyi ve eğitim dili incelenmiştir. Birinci sınıftaki öğrencilere anketler uygulanarak, öğrencilerin ailelerinin eğitim durumu ve gelir düzeyi, cinsiyetleri, yaşları, üniversite giriş puanları, lise mezuniyet notları ve bölümleri (Türkçe İşletme mi yoksa İngilizce İşletme mi) hakkında bilgi edinilmiştir. Anketlerden elde edilen verilerle oluşturulan model tahmin edilmiş ve şu sonuçlara ulaşılmıştır: Ailenin gelir düzeyinin akademik performans üzerinde negatif bir etkisi varken, üniversite giriş puanı başarıyı olumlu yönde etkilemektedir. Öte yandan, eğitim dilinin akademik performans üzerinde bir etkisi olmadığı sonucuna ulaşılmıştır.Article Analysis of the Effect of Propellant Temperature on Interior Ballistics Problem(2018) Evci, C.; Işık, H.This study investigates the effect of conditioning temperature of double base propellants on the interiorballistic parameters such as burning gas temperature, barrel wall temperature, pressure and stresses generated inthe barrel. Interior ballistic problem was solved employing experimental, numerical and analytical methods witha thermo-mechanical approach. Double base propellants were conditioned at different temperatures (52, 35, 21, 0,-20, -35, -54oC). The maximum pressure in the barrel and projectile muzzle velocity were measured for all thepropellants by conducting shooting tests with a special test barrel using 7.62x51 mm NATO ammunition. Vallier-Heydenreich method was employed to determine the transient pressure distribution along the barrel. Thetemperature of burnt gases was calculated by using Noble-Abel equation. The heat transfer analysis was doneusing the commercial software ANSYS to get the transient temperature and stress distributions. Temperaturedistribution through the barrel wall thickness was validated using a FLIR thermal imager. Radial, circumferentialand axial stresses and corresponding equivalent Von Misses stresses were determined numerically andanalytically. The results of the analytical solution for stress analysis validated the finite element solution of interiorballistic problem. Increasing the initial temperature of the propellant resulted in higher temperature and pressureinside the barrel which in turn increased the stresses in the barrel.Article Analyzing the Criteria Affecting Transition To Airplane by Comparing Different Methods(Mehmet Akif Ersoy Univ, 2022) Reyhanoglu, Izay; Tengilimoglu, DilaverThis study, using the multi-vehicle approach, discusses the criteria affecting the transition from alternative transportation modes (car, train, bus) to air transportation between city pairs that neither have a hub status nor non-stop flights between them. If these criteria change, the demand for air transportation will increase. For this purpose, a survey was conducted in the provinces of Kayseri and Bursa, which are among the important trade, industry, and tourism centers in Turkey, in the course of three months between January and March, 2018. Logistic regression, the artificial neural network model, and clustering analyses were applied to the data compiled from questionnaires responded to by 501 individuals in Kayseri and 453 individuals in Bursa. According to the empirical findings, it was concluded that the most significant criteria in the transition to air transportation according to all three methods are the cost of travel/ticket price and non-stop flight. Additionally, it was observed that the Artificial Neural Networks (ANN) model made more accurate predictions compared to others. This study is important since it compares three different methods for the purpose of criteria determination concerning the choice of transportation modes.Article Citation - Scopus: 2Anisotropic Transformation Strain and Its Consequences on Distortion During Austenitization(Amer Soc Testing Materials, 2012) Simsir, Caner; Lubben, Thomas; Hunkel, Martin; Hoffmann, Franz; Zoch, Hans-WernerThe distribution of segregations, which is introduced in the continuous casting process and modified during succeeding manufacturing steps, is considered as an important "distortion potential carrier" for chemically banded steels. This article presents a recently developed mathematical model for integration of the effect of prior forming and cutting operations into heat-treatment simulations by considering "anisotropic transformation strain (ATS)." The model was justified experimentally by simulating the heating and austenitization of dilatometer specimens machined from the forged discs with distinct orientations with respect to the banded microstructure. After the verification, it is used in conjunction with former experimental work to demonstrate that the distribution of fiber flow is one of the important reasons of the dishing of carburized discs. The model provides promising results for process chain simulation to predict the heat-treatment distortion that cannot be predicted with currently available models.Article Citation - WoS: 2Citation - Scopus: 2Application of Agent Methodology in Healthcare Information Systems(Assoc information Communication Technology Education & Science, 2017) Abdalla, Reem; Mishra, AlokThis paper presents a case study to describe the features and the phases of the two agent methodologies. The Gaia methodology for agent oriented analysis and design, Tropos is a detailed agent oriented software engineering methodology to explore each methodology's ability to present solutions for small problems. Also we provide an attempt to discover whether the methodology is in fact understandable and usable. In addition we were collecting and taking notes of the advantages and weaknesses of these methodologies during the study analysis for each methodology and the relationships among their models. The Guardian Angle: Patient-Centered Health Information System (GA: PCHIS) is the personal system to help track, manage, and interpret the subject's health history, and give advice to both patient and provider is used as the case study throughout the paper.Article Citation - WoS: 1Application of Artificial Neural Network-Based Approach for Calculating Dissolved Oxygen Profiles in Kapulukaya Dam Reservoir(Centre Environment Social & Economic Research Publ-ceser, 2007) Tuzun, Ilhami; Soyupak, Selcuk; Ince, Ozlem; Basaran, GokbenAn Artificial Neural Network (ANN) modelling approach has been shown to be successful in calculating time and space dependent dissolved oxygen (DO) concentration profiles in Kapulukaya Dam Reservoir using limited number of input variables. The variation of inflow to the reservoir with respect to time was significantly high. The reservoir operational levels were relatively stable. The Levenberg-Marquardt algorithm was adopted during training. Preprocessing before training and post processing after simulation steps were the treatments applied to raw data and predictions respectively. Different configurations of Multilayer perceptron neural networks were designed by selecting different combinations of number of hidden layers (single and double) and number of neurons within each of the hidden layers. Generalisation was improved and over-fitting problems were eliminated: Early stopping method was applied for improving generalisation. The conventional model criteria of correlation coefficient (R) and mean square errors (MSE) were adopted to compare model performances. The correlation coefficients between neural network estimates and field measurements were as high as 0.96 for daily and monthly data respectively with experiments that involve double layer neural network structure with 31 neurons within each hidden layer. The study results revealed that the data sizes effect model performances up to a certain level.Article Citation - WoS: 1Assessment in English as a Foreign Language in Primary Schools in Turkey(Hacettepe Univ, 2012) Saricoban, Arif; Hasdemir, EsengulTeaching and learning a new language (English) has always been an onerous process demanding time and patience for teachers, students, and related institutions. En this process, teachers aim their students' success by using the most effective techniques and the most suitable curriculum to their needs. These techniques and applications need evaluation in order to find out whether they work or not in terms of taking the students' foreign language proficiency levels to the intended target. At this point, the indispensable part of the whole education process comes forth-assessment. This study aims to scrutinize the current assessment procedure for young learners in primary schools in Turkey.Article Citation - WoS: 2Attitudes of Couples Towards Withdrawal Method in Birth Control(Cukurova Univ, Fac Medicine, 2019) Turk, Rukiye; Terzioglu, FusunPurpose: The aim of this study was to determine the attitudes of couples towards withdrawal method. Materials and Methods: 245 couples (490 individuals) between the ages 15-49 who use the withdrawal method took part in the study. Data was collected using a questionnaire and the Withdrawal Method Attitude Scale were used for data collection.. Results: The study shows that average scores and positive attitudes towards the withdrawal method was higher in women than men, higher in people with lower levels of education than high levels of education. The differences in all cases were statistically significant. Women also recorded higher scores and more positive attitudes than men when it came to the five sub dimensions of the withdrawal method attitude scale and the differences between them were statically significant. Conclusion: This study provides important information for health professionals, due to the positive attitudes of couples towards the withdrawal method. It is recommended that the withdrawal method should be integrated into the education and consultancy services provided in the field of family planning.Article Citation - WoS: 8Automation Testing Tools: a Comparative View(Union Scientists Bulgaria, 2020) Atesogullari, Dilara; Mishra, AlokEffective software testing leads to assurance towards high quality in software development. Automation testing tool facilitates in faster testing process in testing stage thus completion and implementation of software on time. One of the most significant issues for automation is to select the automation-testing tool and the appropriate framework. The objective of this paper is to assess and compare twenty-one available automation-testing tools on twenty attributes in comprehensive manner. This study will assist software testing professionals and researchers towards further insight in this area.Article Barriers to Adherence After A Self-Management Lymphedema Education Program Among Women with Breast Cancer-Related Lymphedema(Lippincott Williams and Wilkins, 2026) Uçar, G.C.; Kapucu, S.; Arıkan Dönmez, A.A.; Ozdemir, O.; Dönmez, Ayşe A.Objectives: – Lymphedema associated with breast cancer is a chronic condition that negatively affects women’s physical functioning, psychosocial well-being, and quality of life. Although self-management education is a fundamental component of lymphedema care, many women struggle to maintain recommended practices in daily life over time. To explore how women with breast cancer-related lymphedema integrate self-management education into daily life over time and to identify barriers to sustained adherence 1 year or more after completing a self-management lymphedema education program (SMLEP). Methods: – A descriptive phenomenological qualitative design was used. In-depth, semistructured interviews were conducted with 17 women diagnosed with breast cancer-related lymphedema. Data were analyzed using qualitative content analysis. Results: – Two overarching themes were identified: problems caused by lymphedema and barriers to self-management. Problems included limitations in activities of daily living, pain, restricted social participation, and body image disturbance. Barriers included economic difficulties, decreased belief in treatment effectiveness, boredom and forgetfulness, lack of family support, absence of monitoring mechanisms, use of the dominant arm, and symptom regression. Conclusions: – Women with breast cancer-related lymphedema face interconnected physical, emotional, and contextual challenges that limit long-term self-management adherence beyond knowledge deficits alone. © 2026Article Citation - Scopus: 1The Battle of Kars During the Russo-Turkish War (1877- 1878) in V. P. Meshcherskiy's 'caucasian Travel Diary'(İstanbul University Faculty of Letters, 2021) Gülseven,A.Y.; International RelationsTravel notes and memoirs contain many contents that fill the gaps in official history, and are thus precious material for historians as primary sources. This study aims to explore the historical context of the Battle of Kars during the Russo-Turkish War of 1877-1878 by focusing on Vladimir Petrovich Meshcherskiy's travel notes and memoirs on the trip from Moscow to Kars during the war in 1877. Although there is a vast literature on the course and consequences of the Russo-Turkish War of 1877-1878, we have little first-hand information from the field to fill the gaps in our knowledge of the developments during and aftermath of the Kars attack. Meshcherskiy's travel diary does not only provide us with a close-up view of the Eastern front of the Russo-Turkish War, but it also sheds light on the attitude of the local people under the Russian siege. Although this diary provides a rich source of information from the viewpoint of Meshcherskiy, a prominent Russian journalist and novelist, it has never been used in the academic literature on the Russo-Turkish War of 1877-1878. © Turkish Journal of History 2021.Article Citation - WoS: 9Citation - Scopus: 12The Behavior of Warm Standby Components With Respect To a Coherent System(Elsevier Science Bv, 2011) Eryilmaz, SerkanThis paper is concerned with a coherent system consisting of active components and equipped with warm standby components. In particular, we study the random quantity which denotes the number of surviving warm standby components at the time of system failure. We represent the distribution of the corresponding random variable in terms of system signature and discuss its potential utilization with a certain optimization problem. (C) 2011 Elsevier B.V. All rights reserved.

